Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0072 |
Symbol | |
ID | 5320899 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 80028 |
End bp | 80942 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640789003 |
Product | hypothetical protein |
Protein accession | YP_001325767 |
Protein GI | 150395300 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0891145 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAACCT GGGTTCTCAT CACCGTCGCA GCGGCCTTCC TTCAAAATGT CCGCTCCTCC ATGCAGAAGC ACTTGAAAGG GGTCATGGGC ACCACCGGCG CGACATTCGT CCGCTTTGGT TTCGGCCTAC CTTTCGCACT TCTTTACCTC GTTCTGCTCT GGCGTGTCGG GGGGCACCAG CTGCCCGTGC CGAACGGCAC ATTCTATCTC TGGGCGGTGG TCGGAGGTTT GGCGCAGATC GCGGCGACTT TCCTGCTCCT GCATCTCTTC TCCTTCCGCA ACTTCGCGGT CGGGACCGCC TATTCCCGGA CCGAACCCGC CCAGGCGGCG CTCTTCGGGT TGATTTTCCT CGGTGAAAAG GCGAGCCAGG GAGCGCTGAT TGCGATCGCC ATTTCAGTCG TCGGCGTTAT GCTGATCTCC GTCGCGCGGA CGACGCTCAG CGCGCGCTCC CTGGTGACCT CCGTTCTCAG CCCTACGGCC GGGATCGGCT TGCTCTCCGG TACTTTCTTC GGGCTCTCAG CCGTTTCCTA TCGTTCGGCC TCGCTTGCAC TGGAGCCAAG TCTGCCTCAG CCGGACTATC TGATCCAGGC GAGCTTCACG CTCGGCTTCG TCATCCTGCT GCAGACGATC ATCATGCTCA TCTGGATCGT CGCGCGCGAA CGCGACGAAC TGAAACGCAT AGGCGCCGCC TGGAAGCCGG CTTTCGTCGT AGGCTTCGTC GGCGCGTCCG CTTCCTTCGG CTGGTTCGCA GCGATGACTT TGCAGCAGGC GGCGATCGTA AAGGTGGTTG CACAGGTGGA GATGATCTTC ACCTTCGCCT CGTCTTTCTT CATCTTCCGG GAATGGATCA ACCGGCTCGA ACTCTTCGGC TGCCTGCTGA TCGTGCTCGG CGTGGTCATG CTGCTCGTGA TATGA
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Protein sequence | METWVLITVA AAFLQNVRSS MQKHLKGVMG TTGATFVRFG FGLPFALLYL VLLWRVGGHQ LPVPNGTFYL WAVVGGLAQI AATFLLLHLF SFRNFAVGTA YSRTEPAQAA LFGLIFLGEK ASQGALIAIA ISVVGVMLIS VARTTLSARS LVTSVLSPTA GIGLLSGTFF GLSAVSYRSA SLALEPSLPQ PDYLIQASFT LGFVILLQTI IMLIWIVARE RDELKRIGAA WKPAFVVGFV GASASFGWFA AMTLQQAAIV KVVAQVEMIF TFASSFFIFR EWINRLELFG CLLIVLGVVM LLVI
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