Gene Smed_0072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0072 
Symbol 
ID5320899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp80028 
End bp80942 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content61% 
IMG OID640789003 
Producthypothetical protein 
Protein accessionYP_001325767 
Protein GI150395300 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0891145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACCT GGGTTCTCAT CACCGTCGCA GCGGCCTTCC TTCAAAATGT CCGCTCCTCC 
ATGCAGAAGC ACTTGAAAGG GGTCATGGGC ACCACCGGCG CGACATTCGT CCGCTTTGGT
TTCGGCCTAC CTTTCGCACT TCTTTACCTC GTTCTGCTCT GGCGTGTCGG GGGGCACCAG
CTGCCCGTGC CGAACGGCAC ATTCTATCTC TGGGCGGTGG TCGGAGGTTT GGCGCAGATC
GCGGCGACTT TCCTGCTCCT GCATCTCTTC TCCTTCCGCA ACTTCGCGGT CGGGACCGCC
TATTCCCGGA CCGAACCCGC CCAGGCGGCG CTCTTCGGGT TGATTTTCCT CGGTGAAAAG
GCGAGCCAGG GAGCGCTGAT TGCGATCGCC ATTTCAGTCG TCGGCGTTAT GCTGATCTCC
GTCGCGCGGA CGACGCTCAG CGCGCGCTCC CTGGTGACCT CCGTTCTCAG CCCTACGGCC
GGGATCGGCT TGCTCTCCGG TACTTTCTTC GGGCTCTCAG CCGTTTCCTA TCGTTCGGCC
TCGCTTGCAC TGGAGCCAAG TCTGCCTCAG CCGGACTATC TGATCCAGGC GAGCTTCACG
CTCGGCTTCG TCATCCTGCT GCAGACGATC ATCATGCTCA TCTGGATCGT CGCGCGCGAA
CGCGACGAAC TGAAACGCAT AGGCGCCGCC TGGAAGCCGG CTTTCGTCGT AGGCTTCGTC
GGCGCGTCCG CTTCCTTCGG CTGGTTCGCA GCGATGACTT TGCAGCAGGC GGCGATCGTA
AAGGTGGTTG CACAGGTGGA GATGATCTTC ACCTTCGCCT CGTCTTTCTT CATCTTCCGG
GAATGGATCA ACCGGCTCGA ACTCTTCGGC TGCCTGCTGA TCGTGCTCGG CGTGGTCATG
CTGCTCGTGA TATGA
 
Protein sequence
METWVLITVA AAFLQNVRSS MQKHLKGVMG TTGATFVRFG FGLPFALLYL VLLWRVGGHQ 
LPVPNGTFYL WAVVGGLAQI AATFLLLHLF SFRNFAVGTA YSRTEPAQAA LFGLIFLGEK
ASQGALIAIA ISVVGVMLIS VARTTLSARS LVTSVLSPTA GIGLLSGTFF GLSAVSYRSA
SLALEPSLPQ PDYLIQASFT LGFVILLQTI IMLIWIVARE RDELKRIGAA WKPAFVVGFV
GASASFGWFA AMTLQQAAIV KVVAQVEMIF TFASSFFIFR EWINRLELFG CLLIVLGVVM
LLVI