| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0071 |
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| Symbol | |
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| ID | 5320898 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 79106 |
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| End bp | 79819 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640789002 |
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| Product | pyrimidine 5'-nucleotidase |
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| Protein accession | YP_001325766 |
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| Protein GI | 150395299 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0142063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGC TCGACCGTCA GCCGACCCGT GCCGAATTCG CCCACGTCAC CGACTGGGTC
TTCGACCTCG ACAACACGCT CTATCCGCAT CACGTCAATC TGTTCTCGCA GATCGACCGC
AACATGACGG CCTATGTCGC CGAACTCCTG TCGCTTGAAC CGGCGGAAGC GAAGAAGCTT
CAGAAGGACT ACTACCGCGA CCACGGCACC ACGCTGCAGG GCCTGATGCT CCACCACGGC
ATCGACCCGA ACGATTTTCT CGAAAGAGCC CACGCCATCG ATTACAGCGT CGTGCCGGCC
GACCCGGCGC TCGGCGAGGC GATCAGGGCT TTACCCGGAC GCAAGTTCAT CTTCACCAAT
GGCAGCGTCG CCCATGCGGA GATGACGGCA AGGGCACTCG GTATCCTCGA GCACTTCGAC
GACATTTTCG ACATCGTCGC GGCCGGTTTC ATACCGAAGC CTGCCGGCGA CACCTACGAC
AAATTCATGG GCCTTCACCG CATCGATACG CAGAACGCGG CCATGTTCGA GGATCTGCCG
CGCAACCTGG TGGTCCCGAA GGCGCTCGGC ATGAAAACGG TGCTGCTCGT ACCGCGCAAT
CTCGAATACG AGTTCGCCGA GGCCTGGGAG ACCTCGAGCG ACGCCGACGA TCAGATCGAC
TATGTCACGG AGGATCTCGC CGCTTTCCTG CGCTGCGTGG TCCCGGCCGT GTAG
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| Protein sequence | MKKLDRQPTR AEFAHVTDWV FDLDNTLYPH HVNLFSQIDR NMTAYVAELL SLEPAEAKKL
QKDYYRDHGT TLQGLMLHHG IDPNDFLERA HAIDYSVVPA DPALGEAIRA LPGRKFIFTN
GSVAHAEMTA RALGILEHFD DIFDIVAAGF IPKPAGDTYD KFMGLHRIDT QNAAMFEDLP
RNLVVPKALG MKTVLLVPRN LEYEFAEAWE TSSDADDQID YVTEDLAAFL RCVVPAV
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