| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0067 |
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| Symbol | |
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| ID | 5320894 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 74665 |
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| End bp | 76545 |
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| Gene Length | 1881 bp |
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| Protein Length | 626 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640788998 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001325762 |
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| Protein GI | 150395295 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.237297 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAAC TAGCAGGGAT CGCACCAGCG ATCGCCGAGG CGTTGGCAAA ACGCGGTTAC
GAAACGCTGA CACCGGTTCA GCAGGCCATG CTGGACCCGG CGCTGGGCAC CGCCGACGCG
CTGGTTTCGG CCCAGACCGG TTCCGGCAAG ACGGTGGCCT TCGGCCTGGC GCTGGCGCCC
ACACTCATCG GTTCGGCAAG ACAATTCGCG CAGCCGGGCG CTCCGCTTGC ACTCGTGATC
GCGCCGACGC GCGAACTGGC GCTGCAGGTC AAGCGCGAGC TTGAATGGCT CTACGAGATT
GCCGGAGCCA CCATCGCCTC CTGCGTGGGC GGCATGGACA TGCGCAGCGA GCGGCGCATG
CTCGATCGCG GCGCCCATAT CGTCGTCGGC ACGCCGGGGC GGCTCTGCGA CCACATCCGC
CGGGGATCCC TCGACATATC GGAGCTGAAA GCCGTCGTGC TCGATGAAGC CGACGAGATG
CTGGATCTCG GCTTCCGCGA GGATCTGGAG TTCATTCTCG AGGCGGCACC GGCGGATCGC
CGCACGCTGA TGTTCTCGGC CACCGTGCCG CGTTCGATCG CGACGCTTGC AAAGAACTAC
CAGCGCGATG CCGTGCGCAT AGGGGTCACC TCCGAACAGA AGCAGCATGG CGATATCGAG
TACCGCGCGC TGCTCGTCGC GCCGAGCGAC CGCGAGAATG CCATCATCAA CGTGCTGCGC
TTTTACGAAG CGCGCAATGC GATCGTCTTC TGTTCGACGC GCGCTGCGGT CAACCATCTG
ACCGCGCGCT TCAACAATCG CGGATTTTCC GTCGTGGCGC TCTCCGGTGA ACTCAGCCAG
AACGAACGAA CCCATGCGCT GCAGGCCATG CGCGACGGCC GCGCTCGCGT ATGTATCGCG
ACCGACGTCG CGGCGCGCGG TATCGACCTT CCGGGCCTGG AGCTGGTGAT CCATGCCGAC
CTGCCGACCA ACTCCGACAC GCTGCTGCAT CGCAGCGGCC GGACCGGCCG CGCCGGCCAG
AAAGGCGTGA GCGCGCTGAT CGTCCCGGTG AATGCGCGTC GCAAGGCGGA ACGGCTGCTC
GAAAATGCAC GAATCACCGC GGCCTGGGCA AAGCCCCCGT CCGCCGACGA GGTGGCGTTG
CGCGACGACG AGCGAATCGC CGCCGACCCG GCGCTCGCCG AGCCTCCGCG CGAGGACGAA
CAGGCGATCG TGGAGACACT GATCGGCCTC TATGGTGCCG AGAAGATTGC CGCTGCCTTC
GTACGGCAGT TCCGTTCGAA CCGCTCCGCG CCAGAGGAGC TTGCCGAGGT CGCCGTTTAC
GACGACCGTA AGAAGGCCCG TCGCGAGAGC CCGGCCTTCT CAGGCGATAG CGATCCCGCC
CCCCGCGCCG ATTTCGCGGA CGGCCGGTGG TTTTCCCTCT CGGTGGGGCG CAAGCAGAAC
GCCGAACCCC GCTGGCTCAT CCCGATGCTT TGCCGTCACG GCAAGCTGAG CAAACGCGAC
ATCGGAGCGA TCCGCATGCA GCCCGAGGAA ACCTACGTCG AGATGACGGC CGACGGGGCC
GAACGCCTTC TTACCGCAAT CGGCCCCGAC CGGATGCTGG AAAGGGGCAT TCGTGTCAAA
GCGCTGCCAG GCGCTCCCGA CGTCTCCAGA TCGCGACAGG ACAGACCGGA TTTCGAAAAG
AAACGGCCGG CGCCCGCATC GGAGCGCGAG CAAAAAGACT TCAAGCCGAA ACGCAAGTTC
GAAAAGCAGC CTTCCGTCGC GAACGATGCA CCTTCGAACG AGAAGCCCTG GAGCAAGAAG
AAGGGCAAGC CCGAGGCGCA GAAAACCGGC GACTTCAAAT CCGGCGCCAA GCGCAATAAT
GCGAAGAATC GTCAGTCTTG A
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| Protein sequence | MTELAGIAPA IAEALAKRGY ETLTPVQQAM LDPALGTADA LVSAQTGSGK TVAFGLALAP
TLIGSARQFA QPGAPLALVI APTRELALQV KRELEWLYEI AGATIASCVG GMDMRSERRM
LDRGAHIVVG TPGRLCDHIR RGSLDISELK AVVLDEADEM LDLGFREDLE FILEAAPADR
RTLMFSATVP RSIATLAKNY QRDAVRIGVT SEQKQHGDIE YRALLVAPSD RENAIINVLR
FYEARNAIVF CSTRAAVNHL TARFNNRGFS VVALSGELSQ NERTHALQAM RDGRARVCIA
TDVAARGIDL PGLELVIHAD LPTNSDTLLH RSGRTGRAGQ KGVSALIVPV NARRKAERLL
ENARITAAWA KPPSADEVAL RDDERIAADP ALAEPPREDE QAIVETLIGL YGAEKIAAAF
VRQFRSNRSA PEELAEVAVY DDRKKARRES PAFSGDSDPA PRADFADGRW FSLSVGRKQN
AEPRWLIPML CRHGKLSKRD IGAIRMQPEE TYVEMTADGA ERLLTAIGPD RMLERGIRVK
ALPGAPDVSR SRQDRPDFEK KRPAPASERE QKDFKPKRKF EKQPSVANDA PSNEKPWSKK
KGKPEAQKTG DFKSGAKRNN AKNRQS
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