Gene Smed_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0064 
Symbol 
ID5320891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp72537 
End bp73349 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content64% 
IMG OID640788995 
Productalpha/beta hydrolase domain-containing protein 
Protein accessionYP_001325759 
Protein GI150395292 
COG category[I] Lipid transport and metabolism 
COG ID[COG0657] Esterase/lipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.295907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGC AATTTACGGA AGAGACGATG CAGACGAGCC AGGGCTCGTG CCGCGCGCGT 
GTCTACCGCG GCGCTTCGCT GTTGTCGCCG CCGCCGCTGG TGCTGCATCT CCACGGCGGT
GGGTTCGTCG GAGACTCAGT GGCGGCGGGT GAAAAGGTGG CCGATGCGCT GGCGGCGGCC
GGCGCGGTCG TCATCTCGCC CGAATACCCT TCCGCGTGCC TGAACCCCTT TCCTGCGGCA
CTCGACTGTG CCTATGCCAT GCTTTCATCC ATGCGCAGCC GCTGCCCGCA ATTCGCACAC
AAGAAGTCGA TGCTGTTCGT CGCCGGCGAG GAGGCGGGTG GCAATATCGC GGCCGGTCTG
GCGCTGATGG CGCGTGACCA GTTCCTGACC GATCTCAAGG GCCAGATCCT GCTTTCGCCG
CTGTTGGACC CATGCCTGGC AACCGCTTCG TTTCGCAAGT TCTGCCCGCA GAGCTCAGTG
CAATCCATCG CAGACGGGTG GCAGCAATAT CTCGGCGAAC GCAGCGGACT GACGCACCCC
TATGCCGCAC CGGGCCATTG CAGCCGGCTT GGCGGCCTCG TTCCCGCCCT CGTCATCACC
AGCGAGGAAT GTCCGATGCG CGATGAGGCC GAAGCCTATG CCGAGCGCCT CCGCAAGGCC
GGCGTTCCGG TGGAAACGCA CATCCTGCCG GGGCGCACTT CGTGGCTGCC TGCCGGCGCC
GCACAGGAAA ACTGGCCGTC ACACAAGGAA ACTATATCCG ACATTTTCTC CCGCTTCTTC
AAGCAGGCGG GAGAGAAGCC GGGCAAAGAG TAA
 
Protein sequence
MNAQFTEETM QTSQGSCRAR VYRGASLLSP PPLVLHLHGG GFVGDSVAAG EKVADALAAA 
GAVVISPEYP SACLNPFPAA LDCAYAMLSS MRSRCPQFAH KKSMLFVAGE EAGGNIAAGL
ALMARDQFLT DLKGQILLSP LLDPCLATAS FRKFCPQSSV QSIADGWQQY LGERSGLTHP
YAAPGHCSRL GGLVPALVIT SEECPMRDEA EAYAERLRKA GVPVETHILP GRTSWLPAGA
AQENWPSHKE TISDIFSRFF KQAGEKPGKE