Gene Smed_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0060 
Symbol 
ID5320887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp65990 
End bp66586 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content63% 
IMG OID640788991 
Producthypothetical protein 
Protein accessionYP_001325755 
Protein GI150395288 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.281057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.443419 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC TTGATGAGGT CCTTGTCTAT ATCAAAGGAC TGTGGCTGCT GATCCAGGGG 
AACCAGGAAG GCTATCATTG GCTGGACATC AGCGAGAGCG GTCTGTGGCG CTCCTTCACG
GCGATCCTCT GGACGCTCCC GGCGCTTGCC GTGGGCTGGG CCTCGTGGCG GCTCTATTAT
CTCTCGGCAT TGCCGACCGG CGCGACCGTC GGCATTGCAT TCTTCGGGAA GCTTCTCATC
GTCGATCTCG TGAGCTGGCT GCTGCCGATC GTGCTGATTG CGCTCCTCTC GCGCCCGCTC
GGCTTCTCGG TGCTGGTTGT GCCGGTGATC GTCACGACCA ATTGGCTCCA GGTCCCGCTG
ACCTATGCAA TGGCGGTGCC GGCCGCGCTT CTGCTGGTCC TCCCCGGCAG CGTCGGCATG
GCCGCCCTGC TGTGGCTCCT GCTGCTCGTC GCCTGCTCCG CGCTGCTCTT CCGCCTTTTG
CGGACCGTTA CCGCCAACCA GAATCTGCTC GCCGCCACGC TTGCCGCGAT CTTTCTGCTG
TCACCGCTGA TGATCATGCA GTTCCTGCAG CGCCTGCTCG GACTGATGCC GGTTTGA
 
Protein sequence
MPLLDEVLVY IKGLWLLIQG NQEGYHWLDI SESGLWRSFT AILWTLPALA VGWASWRLYY 
LSALPTGATV GIAFFGKLLI VDLVSWLLPI VLIALLSRPL GFSVLVVPVI VTTNWLQVPL
TYAMAVPAAL LLVLPGSVGM AALLWLLLLV ACSALLFRLL RTVTANQNLL AATLAAIFLL
SPLMIMQFLQ RLLGLMPV