| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0045 |
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| Symbol | |
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| ID | 5320872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 47291 |
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| End bp | 47710 |
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| Gene Length | 420 bp |
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| Protein Length | 139 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640788976 |
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| Product | XRE family transcriptional regulator |
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| Protein accession | YP_001325740 |
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| Protein GI | 150395273 |
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| COG category | [K] Transcription |
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| COG ID | [COG1396] Predicted transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000742068 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000000000614145 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATTGAGA ATAAAAAGAA GCCGAACCCG ATCGATATTC ATGTCGGTAG CAGGATTCGC
CTTCGTCGGA CGATGCTTGG CATGAGCCAG GAGAAGCTCG GCGAGAGTCT GGGGATTACC
TTCCAGCAGA TCCAGAAGTA CGAAAAAGGC ACGAACCGCG TCGGCGCGAG CCGGTTGCAG
AACATATCGC AGATACTCAA TGTGCCGGTA TCGTTCTTCT TCGAGGATGC GCCGGGGGAT
GGCGGCGGCA CCGGGCCGGG GATGGCCGAG GCGTCGAGCT CCAATTATGT GGTTGATTTC
CTCTCATCCT CGGAAGGTCT GCAGCTTAAC CGCGCCTTCG TCAAGATTTC CGACCCGAAG
GTTCGTCGCA AGCTGGTCGA CCTCGTAAAG GCTCTGGCCG CCGAGGCGGA AAGCGAATAG
|
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| Protein sequence | MIENKKKPNP IDIHVGSRIR LRRTMLGMSQ EKLGESLGIT FQQIQKYEKG TNRVGASRLQ
NISQILNVPV SFFFEDAPGD GGGTGPGMAE ASSSNYVVDF LSSSEGLQLN RAFVKISDPK
VRRKLVDLVK ALAAEAESE
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