Gene Smed_0033 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0033 
Symbol 
ID5320860 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp35732 
End bp36121 
Gene Length390 bp 
Protein Length129 aa 
Translation table11 
GC content64% 
IMG OID640788964 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001325728 
Protein GI150395261 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000118632 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAACAGA CGATCGCCCG CGTGGCCCTG GTCGTGCCCG ACTATGACGA GGCCATCGCC 
TTTTACTGCG AAAGGCTTGG TTTCGATCTC CTCGAGGACG CGGATGCCGG CGGCGGCAAG
CGCTGGGTGG TCGTGCGGCC GAAGGGCGCG GCCGAGACCG CTCTCCTGCT CGCCAGGGCC
GAGGGCGAAA GGCAATGCGC CGCAATCGGC AATCAGACCG CCGGCCGGGT CGGCTTCTTC
CTTTTTACCG ACGATTTTGC GCGCGATCAC GCTGCAATGC TTTCCGCCGG CGTCGAATTC
CTCGAAGTGC CTCGATACGA GGCATACGGA ATTGTCGCAG TGTTCACCGA TCCGTTCGGC
AATCGCTGGG ATCTCCTGCA GCCGGCGTGA
 
Protein sequence
MKQTIARVAL VVPDYDEAIA FYCERLGFDL LEDADAGGGK RWVVVRPKGA AETALLLARA 
EGERQCAAIG NQTAGRVGFF LFTDDFARDH AAMLSAGVEF LEVPRYEAYG IVAVFTDPFG
NRWDLLQPA