| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0027 |
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| Symbol | |
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| ID | 5320854 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 22461 |
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| End bp | 24680 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640788958 |
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| Product | integral membrane sensor hybrid histidine kinase |
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| Protein accession | YP_001325722 |
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| Protein GI | 150395255 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0000312859 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGGGCTG GCGCGGAAAC GGCACGGGAG GCCGGCGGGA CCGCCGCGCC AGCAGCGCCT
ACGGTGAAGA TCGGCGCCGC GCTCCTTTGG CAGCGCCGGT TTTGGGCTGA TCCTTCGGCA
GGGGCGCCGG TCGCGCGGCT CGCCTATGCT CTCGCCGGCA TCGCTGCGGC AATGCTGCTC
CTCGCGGTCG GTGCGAGCGC GGGTCTGCAC CTGTTGTCTG CGATCATTGC GGCCGGGGGC
ATCGCCGGTG CCTTCCTGCT GCTGTCCGGT CGAGACGAAG CGTCCGGGAG CCTTAGGGCC
GGCGCCCGCG AAACTGCGCA GGACGCCGCG GCGCCCCTTG CATCCATCCA TGACGCCATG
GGCGATCTCG TCATCGTCCG CGACCCCGAC GGCAAGGTCA TGCAGGCCAA TGTCGCCTTC
CATGAGCTTT GCGGATGCGC CGACGCGCGG GGCCTGACCT GCGCGGAGCT GGGATTGCGC
TTCGAGCCGA AGCCGGACCC CTACCGCTAC TTCGTGCATA TTTGTACGTC CGCAGGCACG
CGCCTCTACG ATTGGCACGA CGTGCTTGTC CGCGACGCGC ATGGCCGGCT GATGCGCCAT
AGCATTGCTC GAGACGTCAC GGAGGATATG CTGGCGGCAA GCCAGAGAGA GGAGGCGAGG
CAGCGCGCCG AGGAGGCGAG CCGGGCCAAG TCCCGTCTGC TCGCCACCGT CAGTCATGAG
ATCCGTACGC CGCTTTCCGG CATCCTCGGT ATGAGCCGGC TCCTCGCAGA GACGCGGCTG
TCGGACGAGC AGAAGAACTA TCTCGTCGGC ATGCAGCAGT CCGGACACAC CCTGGTCCAA
CTCGTCGAGG ACCTGATCGA TTTTTCCTCG CTTGCCGCCG GACGGTTCCA GCTGCGCCCG
TCGCAGCAGG ACCTGCGTCA GACGGTCGAG AACGTGGTCG AGATGCTGTC TCCCCGCGCG
CATGAGAAGG GTATCGAGAT AGGTGCAACG GTCGCCATCG AGATACCCGA GCGGATGCTG
TTCGATGCGG CGCGCCTGCG CCAGGTGCTG TTCAACGTGG TCGGCAACGC GGTGAAATTC
ACCGAGAAGG GCGGCGTTAT CGTCTCTGTC GATATCGAGA ATGGCTCGTT GCGCATCCGG
GTTGACGATA GCGGACCCGG CATGTCCGCC GACGCGCTCG CACGCGTCTT CGAGGAGTTC
GAGCAGGCCG GTGACGAGGC CCAACGTGCG AAGGGAACGG GGCTCGGCCT CGCAATATCC
CGGCGGATCA TGGAAGCTTT CGGCGGCAGC CTTACCGCCA CGAGCGTTTC CGGCAAGGGA
AGCCGTTTCG AGATCCGGTT CCCGATGGAT GTCGCCGGTC TCTCGACAGT TCCGGTTCGC
CGCGGCATTC TGGCGGGTGC GCATGTGCTT GTCATGGCGC CCGAAGGGCC TTCCTCAGCC
GCGCTTGCCG CCACGATCGA GACGCTGGGC GCCACGTGCC ATAGGGCTTC GACGCTTGCC
GTCGCGCGGC GGATCGTCGC CGGCGCGCTC GCCAATCGGC TGCTGCTGAC GGATATCATT
GTCGATCACC GCCACGCTGG ACAGTCTCGC GAGCTCCTTG CTCTCGAGCC GGCGATCGCC
GGCCTGGGTT TGCGCAGAAC CTATCTCATC AGCCCCGAGG AGCGGGCGGG CCATCCCGTG
AGCCGACTCG GGGGCTATGA GGCCTGGCTG ATCCGCCCTC TTCGCGAGAA ATCGCTGATT
GAGGTGCTAC TTGGGCGACT CAGGGGAATG GAAAAGCGCG ATGCGATCAA CGACAACAGA
CCGGTGCTGC GGGAGGAGCC AGCGGCCGTG AAGGCGGATG TTCGCGCCAT CCTGCTTGCA
GAGGACGACC CTGTGAACGC GCTCGTCTTG CAGTCGGTTC TCAGCCGGGC CGGCCATGCC
GTCGATCACG TCGGCGACTT CATGGCGCTC GAGGCCGCAA TCCGCTCGGC CGCGCCGCCC
CTGATCGTCA CAGACCTCAA CATGCCAGGG GGCGATGGTC TCGACATGCT CCGACGTCTT
CGCGAAGCGG AGGCCGCTGG CAACAGGCGG CGTGTGCCGG TTCTCGTCCT GACCGCGGAC
GCGCGCGCCG ATATCTATGA GCGCCTTCGA GTTGCGGGAG CGGACGCCGT GCTGGTGAAG
CCTGCCGATC CGCAGCGGCT TCTTGCCGAA GTCACCCGCC TCATCCACCC CGCAGCATAG
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| Protein sequence | MRAGAETARE AGGTAAPAAP TVKIGAALLW QRRFWADPSA GAPVARLAYA LAGIAAAMLL
LAVGASAGLH LLSAIIAAGG IAGAFLLLSG RDEASGSLRA GARETAQDAA APLASIHDAM
GDLVIVRDPD GKVMQANVAF HELCGCADAR GLTCAELGLR FEPKPDPYRY FVHICTSAGT
RLYDWHDVLV RDAHGRLMRH SIARDVTEDM LAASQREEAR QRAEEASRAK SRLLATVSHE
IRTPLSGILG MSRLLAETRL SDEQKNYLVG MQQSGHTLVQ LVEDLIDFSS LAAGRFQLRP
SQQDLRQTVE NVVEMLSPRA HEKGIEIGAT VAIEIPERML FDAARLRQVL FNVVGNAVKF
TEKGGVIVSV DIENGSLRIR VDDSGPGMSA DALARVFEEF EQAGDEAQRA KGTGLGLAIS
RRIMEAFGGS LTATSVSGKG SRFEIRFPMD VAGLSTVPVR RGILAGAHVL VMAPEGPSSA
ALAATIETLG ATCHRASTLA VARRIVAGAL ANRLLLTDII VDHRHAGQSR ELLALEPAIA
GLGLRRTYLI SPEERAGHPV SRLGGYEAWL IRPLREKSLI EVLLGRLRGM EKRDAINDNR
PVLREEPAAV KADVRAILLA EDDPVNALVL QSVLSRAGHA VDHVGDFMAL EAAIRSAAPP
LIVTDLNMPG GDGLDMLRRL REAEAAGNRR RVPVLVLTAD ARADIYERLR VAGADAVLVK
PADPQRLLAE VTRLIHPAA
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