Gene Smed_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0023 
Symbol 
ID5320850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp19245 
End bp19703 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content62% 
IMG OID640788954 
Productcarbon monoxide dehydrogenase subunit G 
Protein accessionYP_001325718 
Protein GI150395251 
COG category[S] Function unknown 
COG ID[COG3427] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000137248 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATATGA GCGGAGAGGA ACGTATCGCG GCCGGCCGCG AAGCGGTTTG GCGTGGCCTG 
AACGATGCAG ACATTCTGAA GCGATGCATT CCCGGCTGCC AGTCTCTCGA ATTGATATCG
CCGACGGAGC TTGCGGCCGT GGTCAAGATC AAGATCGGCC CTGTTTCCGC TTCCTTCACC
GGCATGGTCG TTCTGTCAAA CCTCAATCCC CCCGCGAGCT ACACCATATC CGGCGAGGGC
AAGGGCGGAA TAGCCGGTTT CGCCAAGGGC GGGGCTGACG TCACGCTTGT GGACGAGGGC
GCCGAAACGG TGCTTCGCTA CGATGTCAAG GCGGAGATCG GCGGCAAGCT TGCCCAGCTT
GGCTCGCGCC TCGTCGATTC TACGGCGCGC AAGCTCGCCC AGCAATTCTT CGCAGACTTC
AACCTTGCCG TCAGCGGCGA GGCCCAGGCG GCAAGCTGA
 
Protein sequence
MNMSGEERIA AGREAVWRGL NDADILKRCI PGCQSLELIS PTELAAVVKI KIGPVSASFT 
GMVVLSNLNP PASYTISGEG KGGIAGFAKG GADVTLVDEG AETVLRYDVK AEIGGKLAQL
GSRLVDSTAR KLAQQFFADF NLAVSGEAQA AS