Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0016 |
Symbol | |
ID | 5320843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 14869 |
End bp | 15681 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640788947 |
Product | ABC transporter related |
Protein accession | YP_001325711 |
Protein GI | 150395244 |
COG category | [R] General function prediction only |
COG ID | [COG1137] ABC-type (unclassified) transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00016595 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GTGCAGATTC CTTTCCTCCA CAAACGCAAA CGGGGCAAAA AGCCGCCGGC GGCAGCCACA GCTGCCCGCG CGGTCGACAA AACCCGCTAT GACGGCACGC TGATAGCCCG CGGCCTGACG AAGTCCTACC GCTCGCGACG TGTCGTCAAC GGTGTCTCGC TCGTCGTGCG CCGTGGCGAA GCTGTCGGCC TGCTGGGTCC GAACGGTGCG GGCAAAACGA CCTGTTTTTA CATGATCACC GGTCTGGTGC CCGTTGACGA GGGCTCGATC GAGATCAACG GCAACGATGT GACGACGATG CCGATGTACC GCCGGGCGCG GCTCGGCGTC GGCTATCTTC CGCAAGAGGC TTCGATCTTC CGCGGGTTGA CGGTCGAGGA GAACATACGC GCCGTGCTCG AGGTTCACGA CAACAATGTC GAACGCCGGG AGAGCAAGCT CAACGACCTG CTTGGCGAAT TTTCGATCAC GCATTTGCGC ACGTCACCGG CGATTGCGCT TTCGGGCGGC GAGCGGCGGC GCCTTGAAAT CGCCCGTGCA CTCGCGACCG ACCCAACCTT CATGCTGCTC GACGAGCCCT TCGCGGGCGT CGACCCGATC TCCGTCGCCG ACATCCAGGC GCTTGTGCGC CATTTGACCT CACGCGGCAT CGGCGTGCTC ATTACCGACC ACAATGTGCG CGAGACACTC GGCCTGATCG ACCGGGCGTA TATCATCCAT GCCGGCGAAG TGCTGACGCA TGGACGCGCC AACGACATCG TCACCAATCC CGACGTACGC AGGCTCTATC TCGGCGACAA TTTCAGCCTC TGA
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Protein sequence | MQIPFLHKRK RGKKPPAAAT AARAVDKTRY DGTLIARGLT KSYRSRRVVN GVSLVVRRGE AVGLLGPNGA GKTTCFYMIT GLVPVDEGSI EINGNDVTTM PMYRRARLGV GYLPQEASIF RGLTVEENIR AVLEVHDNNV ERRESKLNDL LGEFSITHLR TSPAIALSGG ERRRLEIARA LATDPTFMLL DEPFAGVDPI SVADIQALVR HLTSRGIGVL ITDHNVRETL GLIDRAYIIH AGEVLTHGRA NDIVTNPDVR RLYLGDNFSL
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