Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0014 |
Symbol | |
ID | 5320841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 12312 |
End bp | 12884 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640788945 |
Product | sigma 54 modulation protein/ribosomal protein S30EA |
Protein accession | YP_001325709 |
Protein GI | 150395242 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.625386 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.000164852 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGTGC GCGTGTCTGG GAAACATATG GAAATCGGCG ATTCGTTTCG CGTCCGCATC GGCGAGCAGA TCGAGCAGGC CGTAACCAAA TATTTCGACG GAGGATATTC GAGCCAGGTC ACTGTGGAAA AATCCGGGTC GCGCTTCAGC GCCGACTGCA AGCTTCATCT CGATACGGGC GTGGTATTGC AGGCAAACGG CCAGGCGAAT GAGCCACAGT CAGCCTTCGA CGCGGCTTCG GAGCGCATCG AGAAACGGCT TCGGCGCTAC AAGCGCAAAC TCAAGGACCA TCACAATGGC AACGGGCAGA ATGCCACCGA AGTGGCCTAT CGGGTGATGG ACTCGGTGCC CTTCGAGGAC GACGAAGTTC CCGACGATTA CGCACCGACG ATCGTCGCCG AAACTACGAA ACAGTTGAGA ACCATGTCCG TTGCCAATGC AGTTATGGCC CTGGACATGA CGGATGAACC GGTGCTGATG TTCCGCAGCC CCGGCAAGGA CGACCTGAAC ATCGTCTATC GGCGTAACGA TGGGAATATT GGCTGGATCG ACGCCGCCAA TATCAAGGCA TGA
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Protein sequence | MSVRVSGKHM EIGDSFRVRI GEQIEQAVTK YFDGGYSSQV TVEKSGSRFS ADCKLHLDTG VVLQANGQAN EPQSAFDAAS ERIEKRLRRY KRKLKDHHNG NGQNATEVAY RVMDSVPFED DEVPDDYAPT IVAETTKQLR TMSVANAVMA LDMTDEPVLM FRSPGKDDLN IVYRRNDGNI GWIDAANIKA
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