| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0011 |
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| Symbol | hrcA |
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| ID | 5320838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 9671 |
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| End bp | 10750 |
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| Gene Length | 1080 bp |
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| Protein Length | 359 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640788942 |
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| Product | heat-inducible transcription repressor |
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| Protein accession | YP_001325706 |
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| Protein GI | 150395239 |
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| COG category | [K] Transcription |
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| COG ID | [COG1420] Transcriptional regulator of heat shock gene |
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| TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.000185452 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGTACTGC GCAACCCTGA CAAGAAGGGG ATCGCATCGG CGCTGGATGA GCGCTCCGGC
GAGATCTTCC GCCGTATTGT CGAGAGCTAT CTGGAAAGCG GAGAGCCGCT CGGCTCGCGC
AATCTTTCGC GGCTTTTGCC GATATCGCTG TCGCCTGCCT CGGTGCGCAA CGTCATGAGC
GACCTCGAGG ATCTGGGCCT TATCTATTCG CCCCATGTCA GCGCCGGCCG GCTCCCGACG
CAGACGGGCC TGCGTTTTTT CGTCGATGCC TTTATGCAGG TGGGCAATCT TTCGCCCGAA
GAGCGCGCCT CCATCGAAAG GCAGGTGGGA CCGGGAAATA GGGACCATTC GGTCGAGAAC
CTTCTTACCG AGGCGAGCCA GATGCTGTCG GGCATGTCGC GCGGCGCCGG TCTCGTCATC
ACCACCAAGA GCGATCCCGT CCTCAAGCAT GTCGAGTTTA TCCGGCTGGC GCCGACAAAG
GCGCTTGCGG TGCTCGTCGG CGAACACGAT CAGGTGGAGA ACCGCATCAT CGAGCTGCCG
GCTGGGATCA CGAGCGCGCA GCTCACCGAA GCGGCCAATT TCGTCAACGC CCATCTTGCC
GGGCAGACGA TTCCCGAACT GCGGACGCAG CTGGAAAAGG TGAAGGAGAC CGTTCGCGGC
GAACTCGATG CCCTCTCGCA GGATCTGGTC GAGCGCGGGC TGGCGATCTG GTCCGGAAGC
GAGGGCGACG GCCAGCCGGC GCGACTGATC GTGCGGGGCC GCGCCAATCT GCTCGAAGGA
CTGGAAGGGA CTGAGGATAT CGAGCGGCTG CGCATGCTCT TCGATGACCT CGAAAAGAAG
GACAGCCTGA TCGAGATACT CAACCTTGCC GAGAGCGGCC CGGGCGTGCG TATCTTCATA
GGCTCGGAAA ACAAGCTGTT TTCGCTCTCC GGATCCTCTC TGATCGTCGC GCCCTATCGC
GACAGCGACG ACCGCATTGT GGGCGCGGTC GGGGTTATCG GACCTACCCG GCTCAACTAT
TCCCGCATCG TTCCGATGGT GGATTACACC GCGCAGCTCA TGTCGAGGAT GTCGCGCTGA
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| Protein sequence | MVLRNPDKKG IASALDERSG EIFRRIVESY LESGEPLGSR NLSRLLPISL SPASVRNVMS
DLEDLGLIYS PHVSAGRLPT QTGLRFFVDA FMQVGNLSPE ERASIERQVG PGNRDHSVEN
LLTEASQMLS GMSRGAGLVI TTKSDPVLKH VEFIRLAPTK ALAVLVGEHD QVENRIIELP
AGITSAQLTE AANFVNAHLA GQTIPELRTQ LEKVKETVRG ELDALSQDLV ERGLAIWSGS
EGDGQPARLI VRGRANLLEG LEGTEDIERL RMLFDDLEKK DSLIEILNLA ESGPGVRIFI
GSENKLFSLS GSSLIVAPYR DSDDRIVGAV GVIGPTRLNY SRIVPMVDYT AQLMSRMSR
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