Gene Smed_0009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0009 
Symbol 
ID5320836 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp8305 
End bp8718 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content62% 
IMG OID640788940 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001325704 
Protein GI150395237 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0346] Lactoylglutathione lyase and related lyases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000147506 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCCGACGT TCGAAGGTAT ATTTGAGACT GCGCTTTATG CCGAAGATAT CGACCGGGCG 
GAGGCCTTCT ACGGCATGGT CCTCGGTCTC GAAAAGATTA CGCGCGCCGG CAACCGGCAC
GTCTTTTTCC GCTGCGGTGA AGGCGTGCTG CTGATCTTCA ACCCCGAAGA AACGGTGAAG
CCGCCGGGGC CGAACGCACT TCCGGTGCCC CCGCATGGTG CGAAGGGGAA CGGCCATATG
TGCTTCCGCG TCGCCGCTGA GGCGCTGGAC GCCTGGAAGA CGAAGCTGGA AGCAGCCGGC
GTCGAGATCG AGGCTGATAT CTGTTGGCCG AACGGTGCCC GCTCCTTCTA TTTCCGCGAT
CCGGCTGGAA ACAGCCTCGA ATGCGCGGAA GCCGGCCTCT GGGCCAAGGA CTGA
 
Protein sequence
MPTFEGIFET ALYAEDIDRA EAFYGMVLGL EKITRAGNRH VFFRCGEGVL LIFNPEETVK 
PPGPNALPVP PHGAKGNGHM CFRVAAEALD AWKTKLEAAG VEIEADICWP NGARSFYFRD
PAGNSLECAE AGLWAKD