Gene Smed_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmed_0003 
Symbol 
ID5320830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSinorhizobium medicae WSM419 
KingdomBacteria 
Replicon accessionNC_009636 
Strand
Start bp3085 
End bp3459 
Gene Length375 bp 
Protein Length124 aa 
Translation table11 
GC content61% 
IMG OID640788934 
ProductDGPFAETKE family protein 
Protein accessionYP_001325698 
Protein GI150395231 
COG category[S] Function unknown 
COG ID[COG3795] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.398282 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000769661 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTTACG CCGTACTTTG CTACAATGAT GAAAGCGTCA CCAGCTCCTG GAGCAAGGAG 
GAGGATGACA GGGTCATGCG TGATCTCAGC GTCGTCCAAC GGAAATATGC CGAGTCGGGC
AAGTTGGGGC CGGTTGCGCG CCTGGTGCCG ACGACGGCGG CGGCGACGCT GCGCCACAGT
GCCGGCGAGA CGATCGTCAT CGATGGTCCC TTCGCCGAAA CCAAGGAACA GTTGCTGGGT
TTCTATCTGA TCGATTGCGC CTCGCTCGAC GAAGCGCTCG ACTTCGCGCG CGACCTCAGT
AACGCCAATC CGAGCACGGG CTCTTACGAG GTCCGGCCGC TCGCCCTCTA TAAACCCGGT
GAGTTGCCCT CATGA
 
Protein sequence
MLYAVLCYND ESVTSSWSKE EDDRVMRDLS VVQRKYAESG KLGPVARLVP TTAAATLRHS 
AGETIVIDGP FAETKEQLLG FYLIDCASLD EALDFARDLS NANPSTGSYE VRPLALYKPG
ELPS