Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_0003 |
Symbol | |
ID | 5320830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | + |
Start bp | 3085 |
End bp | 3459 |
Gene Length | 375 bp |
Protein Length | 124 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640788934 |
Product | DGPFAETKE family protein |
Protein accession | YP_001325698 |
Protein GI | 150395231 |
COG category | [S] Function unknown |
COG ID | [COG3795] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.398282 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0000769661 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTTACG CCGTACTTTG CTACAATGAT GAAAGCGTCA CCAGCTCCTG GAGCAAGGAG GAGGATGACA GGGTCATGCG TGATCTCAGC GTCGTCCAAC GGAAATATGC CGAGTCGGGC AAGTTGGGGC CGGTTGCGCG CCTGGTGCCG ACGACGGCGG CGGCGACGCT GCGCCACAGT GCCGGCGAGA CGATCGTCAT CGATGGTCCC TTCGCCGAAA CCAAGGAACA GTTGCTGGGT TTCTATCTGA TCGATTGCGC CTCGCTCGAC GAAGCGCTCG ACTTCGCGCG CGACCTCAGT AACGCCAATC CGAGCACGGG CTCTTACGAG GTCCGGCCGC TCGCCCTCTA TAAACCCGGT GAGTTGCCCT CATGA
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Protein sequence | MLYAVLCYND ESVTSSWSKE EDDRVMRDLS VVQRKYAESG KLGPVARLVP TTAAATLRHS AGETIVIDGP FAETKEQLLG FYLIDCASLD EALDFARDLS NANPSTGSYE VRPLALYKPG ELPS
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