| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_0001 |
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| Symbol | rpsT |
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| ID | 5324463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | + |
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| Start bp | 135 |
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| End bp | 401 |
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| Gene Length | 267 bp |
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| Protein Length | 88 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640788932 |
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| Product | 30S ribosomal protein S20 |
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| Protein accession | YP_001325696 |
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| Protein GI | 150395229 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0268] Ribosomal protein S20 |
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| TIGRFAM ID | [TIGR00029] ribosomal protein S20 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0000869567 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGGCCAATA CAACTTCGGC GAAAAAGGCG ACCCGCAAGA TCGCACGCCG TACCGCAGTG
AACAAGGCCC GTCGTTCGCG TGTTCGTAAC TTCGTCCGCA AGGTCGAAGA GGCGATCGCT
TCCGGCGATC AGGCAGTCGC AGCCGCCGCC CTGAAGGCAG CGCAGCCGGA GCTGATGCGT
GCCGCTACCA AAGGCGTGAT GCATTCCAAC ACGGCGTCGC GTAAGGTTTC GCGCCTGGCG
CAGCGTGTGA AAAGCCTTTC GGCCTAA
|
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| Protein sequence | MANTTSAKKA TRKIARRTAV NKARRSRVRN FVRKVEEAIA SGDQAVAAAA LKAAQPELMR
AATKGVMHSN TASRKVSRLA QRVKSLSA
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