Gene Maeo_1405 details

Gene Information

• Locus tag: Maeo_1405
• Symbol: rpl30p
• ID: 5327255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 1460126
• End bp: 1460590
• Gene Length: 465 bp
• Protein Length: 154 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640788828
• Product: 50S ribosomal protein L30P
• Protein accession: YP_001325593
• Protein GI: 150401827
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG1841] Ribosomal protein L30/L7E
• TIGRFAM ID: [TIGR01309] 50S ribosomal protein L30P, archaeal

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTTACG CAGTTGTAAG AATCAGGGGT AGCGTAGGTG TCAGAGGGAG TATTGCAGAT 
ACTCTTAAAA TGTTAAGGTT ACACAAAGTA AATCATTGTG TAATAATCCC AAACACCGAA 
ACATACAATG GTATGATAAA TAAAGCAAAA GATTTTATTA CCTACGGTGA AATCGACAAA 
GACACCCTCA TAAAAATGAT ATTAAAAAGA GGAAGATTAT CCGGAAATAG GAGAATCGAC 
CAAGAAACAG TTAAAGAATT AATGGGCATG TCAGTTGAAG AATTGGCTGA AAAAATCGTA 
AACGAAGAAA TTCTTTTAAA AGATACACCC ATAAAACCAG TATTCAGATT ACATCCTCCA 
AGAAAAGGAC ATAATAAAGC AGGAATTAAA AAGTCCTTTA CAGTAGGTGG AGCTTTGGGA 
TACAGGGGAG AAAAAATAAG CGAATTATTG AAAAAAATGA TTTAA 

 

Protein sequence

MAYAVVRIRG SVGVRGSIAD TLKMLRLHKV NHCVIIPNTE TYNGMINKAK DFITYGEIDK 
DTLIKMILKR GRLSGNRRID QETVKELMGM SVEELAEKIV NEEILLKDTP IKPVFRLHPP 
RKGHNKAGIK KSFTVGGALG YRGEKISELL KKMI