Gene Maeo_1400 details

Gene Information

• Locus tag: Maeo_1400
• Symbol: rpl6p
• ID: 5327178
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 1456861
• End bp: 1457412
• Gene Length: 552 bp
• Protein Length: 183 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640788823
• Product: 50S ribosomal protein L6P
• Protein accession: YP_001325588
• Protein GI: 150401822
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03653] archaeal ribosomal protein L6P

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCAGTAG CCGCTATTAT AAGGGAAGAA ATAGAAATTC CTGAAAGTGT GACCATTGAA 
GTAATTAACA ACGAAGAAGT AGTTGTTAAA GCTGGTGGGA AAGAACTTAG AAGGATACTA 
TCGTACCCTG ATGTAGTTAT AAAAAAAGAA GACAATAAAG TAGTAGTTGA AAGTCTTTAC 
CCAAGGAAGA AACAAGCTGC AATTATTGGA ACTTTCGCAT CCCACATAAA AAATATAATT 
ACAGGAGTAA GCGAAGGATT CGAATATAAG ATGAAAATAA GATATGCCCA CTTCCCTATG 
AAAATCAGTG TTAAAGGTAA TGAAGTAATT ATCGATAACT TCTTGGGAGA AAAACACCCA 
AGAAAAGCCA CAATTATGGA AGGAGTTAAA GTTAAAGTTA GCGGAGAAGA TGTAATTGTT 
ACTGGAATAG ATAAGGAAAA AACAGGACAG ACCGCTGCAA ACATTGAACA AGCAACAAGA 
GTTAGGGGAA GAGATACCAG AGTATTCCAA GATGGTATCT ACATAGTGGA AAAAGCAGGC 
AAAGTATTGT AA 

 

Protein sequence

MPVAAIIREE IEIPESVTIE VINNEEVVVK AGGKELRRIL SYPDVVIKKE DNKVVVESLY 
PRKKQAAIIG TFASHIKNII TGVSEGFEYK MKIRYAHFPM KISVKGNEVI IDNFLGEKHP 
RKATIMEGVK VKVSGEDVIV TGIDKEKTGQ TAANIEQATR VRGRDTRVFQ DGIYIVEKAG 
KVL