Gene Maeo_1397 details

Gene Information

• Locus tag: Maeo_1397
• Symbol: rpl5p
• ID: 5327233
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: +
• Start bp: 1455638
• End bp: 1456183
• Gene Length: 546 bp
• Protein Length: 181 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640788820
• Product: 50S ribosomal protein L5P
• Protein accession: YP_001325585
• Protein GI: 150401819
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0094] Ribosomal protein L5

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACTTCC AAGAAGCATG GGAAAAACAG CCTATGAGTA AGCCTAGAAT AGAGAAGGTT 
ACTGTGAATA TGGGGGTAGG TGAGAGTGGG GATAAATTAC TCACTGCTGA GAAGGTTGTT 
AGTGAAATTA CCGGTCAAAA ACCCGTAAGA ACATTGGCAA AACAAACAAA CCCTGCGTTT 
AACATTAGAA AAAAACTTCC AATTGGTTTA AAAATCACAT TGAGAGGTAA AAAAGCAGAG 
GAGTTTTTAA AAGATGCTTT TACGGCATTT ACAGCATCAG GAAAACAACT ATTCACCTAT 
TCATTTGACA AAAGAGGAAA TTTCTCATTT GGTATTCCAG AACATATAGA CTTCCCAAAT 
CAAAAATATG ACCCATCAGT TGGAATCTAT GGTATGGATA TATGTGTAAC CTTTGAAAAA 
CCAGGATACA GTGTTAAAAG AAGAAAAGCT AAAAGAGCAA ATATTCCAGC GAAACATCTA 
GTAAGCAAAG AAGAAGCTAT TAATTATATC GAAACTATAT ATGGTATAAA GGTAGAGCAG 
GAATAA 

 

Protein sequence

MNFQEAWEKQ PMSKPRIEKV TVNMGVGESG DKLLTAEKVV SEITGQKPVR TLAKQTNPAF 
NIRKKLPIGL KITLRGKKAE EFLKDAFTAF TASGKQLFTY SFDKRGNFSF GIPEHIDFPN 
QKYDPSVGIY GMDICVTFEK PGYSVKRRKA KRANIPAKHL VSKEEAINYI ETIYGIKVEQ 
E