| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1336 |
|---|
| Symbol | |
|---|
| ID | 5327107 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 1397344 |
|---|
| End bp | 1398531 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640788759 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001325524 |
|---|
| Protein GI | 150401758 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCAT TAGATATAAT TTCGTTTGCA TTTAATAATA TAAAACAAAA AAAAACTCAA
AGTATGCTTA CTATGATGGG AATTGTCATA GGGATTTTTG CTATTGTTAG TTTAGTATCT
ATTGGATATG GTGTTGAAGA ATATATGCAC GGCGAAATGA TGAAAATGGG GGGAAATAAA
TTAACAATAT TGCCAATTAA ACAATTTGGT ATTCCTCCCA CTCATTTTTT TACAGATAAA
GATATTAAGG CAATTCACAA TATTAGGGGA GTGGATTCCG TGGTATATGG TTGGTACGGT
GGAACAGATA TTGAATATAA TAACGAAAAA AAATATGTTG GTTATTTCTA CGGAGCTCCA
AACAATATTA AAAAAGTATA TTCTGAAACA GGATATAATA TTGAAGAAGG TAGATGGTTA
TCCAACAGTG ATACATATAA ATGCAATATA GGATATGGTG TAGCCCATAG CCTATTTAAT
AAAAATGTAA AAATAGGAGA TAGAATAATT GTAAAGGACA AAAAATTTAA AGTAGTTGGA
ATTATGGGGC AGGTTGGAAA CCAGCAAGAT GATAATATAA TTATGATTCC AATTTCTGTG
GGAGAAAACA TTTTTGACAA GAAAAATGAA TATAACTTTA TCACCGTTGT AGTTAAAGAT
GGTGCAGATA TGGCAAAAAT ATCAAACGAA ATATCAAACA AACTTGAAAA ATCATTCGGA
GATACTGAAT TTTCAGTTCT TTCGGCTGAA CAGTTGGCTG AAACCATTGG TGGCGTATTA
AGCGTTTTGA CATTATTTAT ATCAGGAGTT GCAGGAATAT CTTTATTGGT GGGGGCTGTT
GGTATATCCA ACACCACTCA TATGAGCATA TTACAAAGAA AAAAAGATAT CGGAATATTA
AAATCACTTG GTGCAGAGAC TACGGACATA TTGGCAATTT TTATTGTAGA ATCTGGATTT
TTAGGATTAT TTGGTGGGAT AGTTGGAATT ATATTTGGAA TAATTGCGGC AAAAATTATT
GAAAATATCG CCCATGCCTC TGGTTATTTA ATGGTTAATG CATGGATATC TTGGGAATTA
ATAGTTGGTG TTTTGATATT TTCATTTATG ATGGGAGTAA TAAGCGGATA TTTACCTGCA
CGAAGTGGGG CAAAACTTAA TCCCATTGAT ACATTACGGG GCGAATAA
|
|---|
| Protein sequence | MKPLDIISFA FNNIKQKKTQ SMLTMMGIVI GIFAIVSLVS IGYGVEEYMH GEMMKMGGNK
LTILPIKQFG IPPTHFFTDK DIKAIHNIRG VDSVVYGWYG GTDIEYNNEK KYVGYFYGAP
NNIKKVYSET GYNIEEGRWL SNSDTYKCNI GYGVAHSLFN KNVKIGDRII VKDKKFKVVG
IMGQVGNQQD DNIIMIPISV GENIFDKKNE YNFITVVVKD GADMAKISNE ISNKLEKSFG
DTEFSVLSAE QLAETIGGVL SVLTLFISGV AGISLLVGAV GISNTTHMSI LQRKKDIGIL
KSLGAETTDI LAIFIVESGF LGLFGGIVGI IFGIIAAKII ENIAHASGYL MVNAWISWEL
IVGVLIFSFM MGVISGYLPA RSGAKLNPID TLRGE
|
|---|
| |