| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1331 |
|---|
| Symbol | |
|---|
| ID | 5326322 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1392882 |
|---|
| End bp | 1393811 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 640788754 |
|---|
| Product | auxin efflux carrier |
|---|
| Protein accession | YP_001325519 |
|---|
| Protein GI | 150401753 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0679] Predicted permeases |
|---|
| TIGRFAM ID | [TIGR00946] he Auxin Efflux Carrier (AEC) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.209849 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATAA TGATTATAAT AATTTTATTA ATATTAACGG GATATTTATC AAAATATTTA
AAAATATTAA AAGAACAGGA TAGAACTGTG CTTAATAATA TTGTGGTTTA TATTGCCATG
CCATCTACCA TATTTTTAAC AATAATGTCT AATGTTTCGC CCTCTGATTT ACCTCAATAT
ATAAAACTTC CATTTTTAAT ATTTATAACA TTTGCATTAT GTGGGGGTAT TGGGTATATT
ATTGGGAGAC TGTTAAAATT AAATAAAGAA TCATTAGGGG GGTTAATATT AGTTTGTGGA
TTGGCTAACA CTGGATTTTT AGGATATCCT ATTATATATG GATTTTATGG TTCGGAGGGG
CTATCAAGAG CAATATTTTG CGACATGGGA GGAGTATTCA CAAGTTTATT GTTTGGAACT
TATGTTGGCA TAACCTTTGG AAGAAGTAAT ATTGATAAAA ATAAAAATGT TTTAAAATCA
GTAATAACGG AGCTCCTAAA ATTCCCACCG CTAATAACTG CTATGATTAG TGTGCTTTTG
ATATTGTTGG GCGTATCTAT TTCCAATTTA CCAGAATATT TTACAAATAC ATTATCCTAT
TTATCAAATG CCACAATTCC ATTAATTATG ATTTCATTGG GGCTGTCTTT ATCTCCAAGC
TCTGCAAAAT TTGGAATGAA ATTTGGACTT ATAGCAACCA TTGTAAGAAT GGGGATTGCA
CCACTAATTA TGTTAGGGAG CTCCATTATA TTTTCAATGG GCGGATTGGA AAAAAATGTA
TTATTACTTG AATCAGCTAT GCCCTCTGCA ATGATGTCAC TTGTATTTGC TGTGCTTTAT
GATTTAGATG TAAAATTAGT TGCTTCGGCA TGTTTCATAA CTACTGTTAT TTCTTTTGCA
ATTTTGCCGA TAATATATAG TTTATTATAA
|
|---|
| Protein sequence | MDIMIIIILL ILTGYLSKYL KILKEQDRTV LNNIVVYIAM PSTIFLTIMS NVSPSDLPQY
IKLPFLIFIT FALCGGIGYI IGRLLKLNKE SLGGLILVCG LANTGFLGYP IIYGFYGSEG
LSRAIFCDMG GVFTSLLFGT YVGITFGRSN IDKNKNVLKS VITELLKFPP LITAMISVLL
ILLGVSISNL PEYFTNTLSY LSNATIPLIM ISLGLSLSPS SAKFGMKFGL IATIVRMGIA
PLIMLGSSII FSMGGLEKNV LLLESAMPSA MMSLVFAVLY DLDVKLVASA CFITTVISFA
ILPIIYSLL
|
|---|
| |