Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1307 |
Symbol | |
ID | 5327399 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 1367723 |
End bp | 1368898 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640788720 |
Product | geranylgeranyl reductase |
Protein accession | YP_001325495 |
Protein GI | 150401729 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.398981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAT TACTTGATAG TGAATACGAT GTTATTGTTA TCGGTGCAGG TCCAGGAGGG AGTATGGCAT CATATCATTC GTCAATAAAT GGTGCAAAAA CCCTATTAAT AGATAAATCC CAAGAAATTG GAACTCCGGT TAGATGTGCA GAAGCTGTCC CATATCTTGA TGAATTTGGA ATAAATCCCG ACCCTTCATT TATTAGGAGT AAAATTGATG GAGGAATATT AGTTGCCCCA AATGGTAAAA AAATAATTGT TAAAGGAGGA AAAACACAAG GGTATGTTGT AGAAAGAAAA ATATTCGACA AACACCTTGC AGTTAGAAGT GCAAATGTTG GAACTAAAAT AGCCATTAAA AGTAGAGTCG TAGGATTAGA TTATGATGGC GAAAAATATA CTGTTATTGT CAATCATCTT GGACAGATAT ACGCCATAAA AGCAAAAATT GTAATTGCTG CTGATGGTGT TGAAAGCTCA ATTGCAGAAA TGGCAGGAAT AAAGTGCAAG AAAAAAGTCA CAGAAATATG TTCCTGTGCC GAGTATGAAA TGACCAATGT TAAATTACTT GATAAAAATA TGATGGAATT TTATTTCGGA GATATTTGTC CCAAAGGGTA TGTGTGGATA TTCCCAAAAG GAGAAACTGC AAATGTAGGT TTGGGAATTA TAGACAGTAA AAAGAAAGCC ATCGATTACT TAAATGAATT TTTAGAACAT CCATTGTTGG AAGGAAGGTT GGATAATGCC ACACCAATTG AATTTAAATG TGGTGGAGCT CCGGTTGGAG GGCCAATTGA AAAAACTGTG GCCGATAATT TCATGGTTGT TGGTGATGCC GCTGGGCAAA TCAGTCCAAT ATCTGGCGGA GGTATCTATT TGTCATTAAG CTGTGGTTCA ATTGCAGGAA AAGTTGCGGG AGAAGCCATT AAAAGCAACA ATTGTTCAGA AGATTATTTA GTAGAATATG AAAATAGATG GAAAGAAAAA TATTATAAAT TATTAATGGA TGAATTAAAA TATAAAAAAG TTCTTCAAAA ATTCAGTGAA AAAGAGTTAA ATGCTTTGGC AGACGCTATG GATGAAAGAT TGGAAGAAAT TGATGTGGCA AAAATAGCAT TTAGAGCGGT GAAAAGGGCA CCATCTCTAT TAAAATATTT TAAAGATATT ATATAA
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Protein sequence | MRELLDSEYD VIVIGAGPGG SMASYHSSIN GAKTLLIDKS QEIGTPVRCA EAVPYLDEFG INPDPSFIRS KIDGGILVAP NGKKIIVKGG KTQGYVVERK IFDKHLAVRS ANVGTKIAIK SRVVGLDYDG EKYTVIVNHL GQIYAIKAKI VIAADGVESS IAEMAGIKCK KKVTEICSCA EYEMTNVKLL DKNMMEFYFG DICPKGYVWI FPKGETANVG LGIIDSKKKA IDYLNEFLEH PLLEGRLDNA TPIEFKCGGA PVGGPIEKTV ADNFMVVGDA AGQISPISGG GIYLSLSCGS IAGKVAGEAI KSNNCSEDYL VEYENRWKEK YYKLLMDELK YKKVLQKFSE KELNALADAM DERLEEIDVA KIAFRAVKRA PSLLKYFKDI I
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