Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1222 |
Symbol | |
ID | 5327489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 1291062 |
End bp | 1292057 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640788626 |
Product | H/ACA RNA-protein complex component Cbf5p |
Protein accession | YP_001325410 |
Protein GI | 150401644 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00425] rRNA pseudouridine synthase, putative [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAATTAA TTACAAAGGA AGAATCAAAG ACAAATTATG AATATGGTTG CGACCCATAC AATAGACCAA TAGGGGAGCT CCTTAAAAAT GGTATTGTTG TAATAGATAA ACCATCGGGA CCAACTTCCC ATGAGGTATC TGCATGGGTT AGAGATATAT TAAAGCTAAA ACTTGCAGGG CATGGCGGAA CACTTGACCC AAAAGTGACA GGCGTATTGC CTGTTGCACT GGAAAACACT TCAAAATGTA TATCTGTGTG GCATATGATT CCTAAGGAGT ATGTTTGTTT AATGCACTTA CATAGAGATA CGGAAGAGGA GGAATTATTA AAAATATTTA AAAAATTCAC AGGCAGGATA TTTCAAAGAC CGCCTTTAAA AGCCGCCGTA AAAAGAAGTT TAAGAATTAG GAAAATTTAC GAATTAGAAT TGCTTGAAAA AGACGGAAGA GATGTATTAT TTAGAGTAAG ATGTCAATCC GGAACATACA TAAGAACACT TGCCGAAGAT ATGGGGGAAG CACTTGGAAC TTCGGCACAT ATGCAGGAGC TCCGAAGAAT TGTAAGTGGA CCATTCACAG AAAAAGATAT AGTTTATTTG CAGGATTTAA CAGATGCATA TATTTTTTGG AAAGAAAACG GGGACGAAAC AGAACTAAGA AAAATAATAA AACCTATGGA ATATGGACTT CAACATATCA ATAAAATAAT TGTTAAAGAT AGTGCAGTAG ATGCTATATG CCATGGTGCA AATGTATATT TAAACGGAGT ATCCAAATTA AGTAAAGGAA TAGGGGCAGA CGAAACCGTA TTAATTGAAA CATTAAAAGG GGAGGCAATA GGAATAGGAA CGGCACTATT AAACACCAAA AATGTATTAA AAGAAAGTAA AAACGAAGAA GATAATAGGG AAAAATATAA AGAACCTATT GTAGATATTG AAAGGATTTT TATGAGTCCA AATACATATC CTAAAATGTG GAAAAAGAAA AAATAA
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Protein sequence | MELITKEESK TNYEYGCDPY NRPIGELLKN GIVVIDKPSG PTSHEVSAWV RDILKLKLAG HGGTLDPKVT GVLPVALENT SKCISVWHMI PKEYVCLMHL HRDTEEEELL KIFKKFTGRI FQRPPLKAAV KRSLRIRKIY ELELLEKDGR DVLFRVRCQS GTYIRTLAED MGEALGTSAH MQELRRIVSG PFTEKDIVYL QDLTDAYIFW KENGDETELR KIIKPMEYGL QHINKIIVKD SAVDAICHGA NVYLNGVSKL SKGIGADETV LIETLKGEAI GIGTALLNTK NVLKESKNEE DNREKYKEPI VDIERIFMSP NTYPKMWKKK K
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