| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1179 |
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| Symbol | |
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| ID | 5327408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | + |
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| Start bp | 1245852 |
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| End bp | 1246547 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640788584 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001325368 |
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| Protein GI | 150401602 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR02253] HAD superfamily (subfamily IA) hydrolase, TIGR02253 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.269982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAATAA AGGGAGTGTT ATTTGATTTA GATGACACAT TATACAATTC TTCAAGTTTT
GCGGATAGGG CAAGAAAGGA GGCCGTGAGA ATGATGGTAG ATGCGGGACT AGATACTACG
GAAGAAAATG CTCGAAAAGT TCTCCAAAAA ATAATATCTC AAAAAGGTTC AAATTATTCG
GGCCATTTCA ATGACCTTGT AAAAACAATC ACTGGAACTT ATGATCCTAA ATTAATAGTA
ACTGGTATAA TTACATACCA TAATATTAAA TTTGCACTAT TAAGACCATA TCCAAATACA
ATAAAGACAT TGGTGGAGTT AAAAAAGATG GGGTTAAAAT TGGGAGTAAT GACTGATGGA
ATAACTTTAA AACAATGGGA AAAACTTATA AGGCTTGGAA TAGTTGATTT CTTTGATGTG
GTAATTACTT CGGAAGAATT TGGATTGGGG AAACCAAATA CAGAATTTTA TGAATATGCA
ATTAAAAAAA TGGATTTAAA TCCTGATGAG ATTGTATTCG TTGGGGATAG AGTGGATAGA
GATATAATTC CAGCTAAAAA GGTAGGTATG GACGCAATTA GGTTGTTGGA AGGCAAATAT
AAAAATGCAG AGGACACCGT AAGTCAATAT AAAATAAAGG ATATATATGA AGCTGTGGAT
ATTATAAAAA ATTTAGTATC TTCAAATGAA CCGTGA
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| Protein sequence | MAIKGVLFDL DDTLYNSSSF ADRARKEAVR MMVDAGLDTT EENARKVLQK IISQKGSNYS
GHFNDLVKTI TGTYDPKLIV TGIITYHNIK FALLRPYPNT IKTLVELKKM GLKLGVMTDG
ITLKQWEKLI RLGIVDFFDV VITSEEFGLG KPNTEFYEYA IKKMDLNPDE IVFVGDRVDR
DIIPAKKVGM DAIRLLEGKY KNAEDTVSQY KIKDIYEAVD IIKNLVSSNE P
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