Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1166 |
Symbol | |
ID | 5326686 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 1223436 |
End bp | 1225358 |
Gene Length | 1923 bp |
Protein Length | 640 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640788569 |
Product | DNA polymerase II small subunit |
Protein accession | YP_001325355 |
Protein GI | 150401589 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1311] Archaeal DNA polymerase II, small subunit/DNA polymerase delta, subunit B |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGATATAA TCAATGAATT TTTAAATATT GAAATATTAT TGGGGCCCAA AACATACAAT AGAATTAAAA AATTAAAAGA TAATGAATTA ACCCATTTAC TCAATAATAT CAAAAAATTT AAAACTATAA ATAATAAATT AATATTATTA AATAACCATT TTTTAGATTT ATTTTTAAAC CATCCTCTTG ACGAAATAAT TAATAATTAT AAAGATTTTG ATTTTATATC CTGCTATATT TCAAATGAGG AGCTCCCAAA ATCGCAAAGC GATTTTTACA ATAATACATA TATTACAGAA GAAAATGTTG ATGCCTCAAA AATAAAAAAT AATGAATTAA AAGCAGAAGA AAATGTTGAA GATGAATTTA TAGGGGAAAT TTTAGATGAA ATGGATTATA ATTATAATCC ATACAATGAT ACAGTAGAAA CGGAAAATAA AGAAGATAAT ACCAATATTG CAACTAATAT TGCAACCAAT ACACACAATA CCGCCCCAAC AGATATCGAA CAAAAAGAAG AAATACAAAA ATTAGAAACC CCCAAAAATA CATTGGATGA AAGATTATTA AAATTAGAAA AAGAAAGAAT CCACAGAATA AATAAAATAA AATCAATCAA AAATAGTGTA TTTAATAAAA TAAACTATGT TGCAAAGGAT ATTGATTCTC AAATACATAT ATATGATAAA TGGGATATTT CTGGAAAATC CACCTGCGAA GGAAGTCTTA ACGATTTTAT TGGGTATTTT AATGATAGAT ATTCAAAAAT TAAAGCCATG ATTGAAAGAA AGATAAATAA AAAGGCATAT CCATTAAGTA AAATTCAAAG AATGAAAAAC GAAAAAGATG TTTTTGTAGT TGGAATTGTT ACGGATATGA ATACCACTAA AAAAGGACAC AAAAGGGTAG TAATTGAAGA TGATGAGGCC ATATTTTCCG TAATTATTAT GAAGGATAAA ATTGAAAAAG GGGAGCTCCC CGACGATATA TTGTTAGACG AAGTCATAGG ATTTGAAGGG GCAATATCCC AAGATGGGGG CGTGATGTTT CCCAATAATT GCATAAGACC AGATATCACC CCAAAACCTC CGAAAAGTAT AGACGAAAAA ATATACACTG CATTTTTATC CGATGTTCAT ATAGGGAGCT ACGAGTTTTT AGAGGACTCA TTTAAAAAAT TCATAGAGCT ATTAAATGGA GATACAAAAA ACGGATTGGA AGAAAAAATA GTAAGCAGAT TAAAATATAT TTCAATTGCA GGAGATTTAG TGGATGGTGT AGGGATATAC CCAGGTCAAG AATATGATTT ATATGATGTG GATATTATAT CCCAATATAA AGAAGTGGCA ACATATATTG AGCAAATTCC AGAACATATT GATGTTATAA TCTCCCCGGG AAACCACGAT GCCCTTAGAC CAGCCGAACC ACAGCCAATA TTTCCTAAAA GAATTTTAGA TTTATTTGAT GGATTAAATA ATGTGCATTT TGTTAGCAAT CCTGGATTTG TAAATATACA TGGTTTGGAT TTTTTATTAT ATCATGGTAG AAGCTTTGAC GATGTGATAG GACAAATATC TTCGGCAAGT TATCAAGACC CCACCTCAAT TATGAAAGAA TTATTAAAAA GAAGACATTT ATGCCCAACT TATGGGGGAA GATGTCCAAT AGCCCCAGAA AAAGAAGATT ATTTAGTAAT TCATAATGAA CCAGATATAT TCCATACTGG ACATATTCAC ATTAACGGAT ATGGGGCGTA TAAAGGAACA ACATTAATAA ACAGTGGAAC ATTTCAAGAA CAGACGGATT TCCAGAAAAG AATGGGAATT CACCCTACTC CTGCAAGGAT TCCAATAATC GATATGTCCA AAAATGGTAG TCAATATATC GAATGGGACA ACGGAAAAAT AAAAGTTATT TAA
|
Protein sequence | MDIINEFLNI EILLGPKTYN RIKKLKDNEL THLLNNIKKF KTINNKLILL NNHFLDLFLN HPLDEIINNY KDFDFISCYI SNEELPKSQS DFYNNTYITE ENVDASKIKN NELKAEENVE DEFIGEILDE MDYNYNPYND TVETENKEDN TNIATNIATN THNTAPTDIE QKEEIQKLET PKNTLDERLL KLEKERIHRI NKIKSIKNSV FNKINYVAKD IDSQIHIYDK WDISGKSTCE GSLNDFIGYF NDRYSKIKAM IERKINKKAY PLSKIQRMKN EKDVFVVGIV TDMNTTKKGH KRVVIEDDEA IFSVIIMKDK IEKGELPDDI LLDEVIGFEG AISQDGGVMF PNNCIRPDIT PKPPKSIDEK IYTAFLSDVH IGSYEFLEDS FKKFIELLNG DTKNGLEEKI VSRLKYISIA GDLVDGVGIY PGQEYDLYDV DIISQYKEVA TYIEQIPEHI DVIISPGNHD ALRPAEPQPI FPKRILDLFD GLNNVHFVSN PGFVNIHGLD FLLYHGRSFD DVIGQISSAS YQDPTSIMKE LLKRRHLCPT YGGRCPIAPE KEDYLVIHNE PDIFHTGHIH INGYGAYKGT TLINSGTFQE QTDFQKRMGI HPTPARIPII DMSKNGSQYI EWDNGKIKVI
|
| |