Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Maeo_1154 |
Symbol | |
ID | 5327062 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus aeolicus Nankai-3 |
Kingdom | Archaea |
Replicon accession | NC_009635 |
Strand | - |
Start bp | 1211245 |
End bp | 1212879 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640788557 |
Product | type II secretion system protein E |
Protein accession | YP_001325343 |
Protein GI | 150401577 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGACTAT TTGATAAATC AAAAAAACCA ACATCCAGAA CATTAAATAA AAGTAAAGTA AGTAAAGTAG GAGCTCCCAA AGATACTAAA AATAAAATAA CTTCCCTGCA AAAAAATACA GCTCAAAATT CAATAGGCAA AACAGATTCA ACTGCAAAAT ATATGGGCGA TGAATCTTAT GGGGAAAAGG AAATTATTGA TAGTTATGAA GTAACTGTTG ATGGAGCTCC ATTTGATATA GTTCTTGAAA AAATTAATGG CGTCATATAT TATGCCGTGC CCGAAATGGA CTCATTAGAT AAAATATGGG ATAAATTCTC AATAGAAATA TTAGATAATC TAAAAAACGA ACTTAGTAGT AAAATTTTCG AAGATATAAA AAATCTAAGG GAATATTTAA GCGAATTTTG TGAAAGATAT AATATAATAT TGAAAAAAGA GGAAATTGAA TCACTATCCA AATATTATTA TTTATCATTG GGAAAACTTG GATTGATAGA AATACCATTG CATGATAGTA ATTTAGAGGA ATTAATGGTA AATGGAAATA GTGCCCCTAC ATTTGTTGCA CATAGAAAAT ATGATATGTG TGAAACCCAT ATGAAATTAG ATAATAATGA ATTAATGAGG GTTGTTGAAG GCATTGCTAT GCTGGCAAAT AGAACCATTG ATTCAAGAAC TCCAATGTTA GATGCTTTTT TACCGGATGG TAGTAGGGTA AATGCTACAA CACCAGATGT AACATTAAAT GGAGTTACCC TGACAATACG TAAATTCTCA GAAGACCCGT TAACTATTGT AGATTTAATA AAGTTTGGGA CATTTAATAT AGAGCTTGCT GCATTTTTAT GGCAAGCTGT TGAAGGTTAT TTTGGTTCAA AGCCCGCAAA TACGCTGATT GCAGGAGGTA CTGGTTCAGG TAAAACTACT ACCCTTAATG TCGTTTCACT ATTTTCAATG TATACCGATA GAATTATAAC TGTTGAAGAT ACGCCCGAGT TACAAATTCC ACATAAACAT GTTGTTAAAA TGATAACCCG ACCTGCAAGA CCAGGTATTG AAGGATATGA AGTTACAATG AATGATTTAA TTAAAAACAC TTTAAGAATG AGGCCCGATA GAATATTTGT AGGAGAAGTT AGGGGCCCAG AGGCCCAATC ATTATTAACT GCAATGAATA CAGGGCATGA CGGTTGTTCT GGAACACTTC ACGCAAACAG TGCCGATGAG GCCATTTCTA GATTAATTAA TCCTCCGATG TCAGTTCCCA AAATTATGGT TGGAGCATTG GATTTTATTA TAAACCAGCA AAGAATTAAA AGAAATAGAA AAACCATTAG AAGGATATTA AGTATAATGG AAATAGGGGG AGAAGGAGAG AACATAACCA AAACTGAATT GTTTAAATAT GACGGTATGA ATGACGAGAT TGTTAAAACT GGTATATGTA TGTGGGAAGA AGAAGTTTGT AGAATTGCAG GTATTGACAG AACCGAATTA ATAAAAGATA GGATAGATAG GGAAGAAGTA TTGAAATATA TGATTAATAA TAATATTAAC GGCATAAAAA ATGTTGGAAA AATTATATTG AGTTATCAAG AAAATCCGGA AAAAGTTATG AGCAAGATTG GATAG
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Protein sequence | MGLFDKSKKP TSRTLNKSKV SKVGAPKDTK NKITSLQKNT AQNSIGKTDS TAKYMGDESY GEKEIIDSYE VTVDGAPFDI VLEKINGVIY YAVPEMDSLD KIWDKFSIEI LDNLKNELSS KIFEDIKNLR EYLSEFCERY NIILKKEEIE SLSKYYYLSL GKLGLIEIPL HDSNLEELMV NGNSAPTFVA HRKYDMCETH MKLDNNELMR VVEGIAMLAN RTIDSRTPML DAFLPDGSRV NATTPDVTLN GVTLTIRKFS EDPLTIVDLI KFGTFNIELA AFLWQAVEGY FGSKPANTLI AGGTGSGKTT TLNVVSLFSM YTDRIITVED TPELQIPHKH VVKMITRPAR PGIEGYEVTM NDLIKNTLRM RPDRIFVGEV RGPEAQSLLT AMNTGHDGCS GTLHANSADE AISRLINPPM SVPKIMVGAL DFIINQQRIK RNRKTIRRIL SIMEIGGEGE NITKTELFKY DGMNDEIVKT GICMWEEEVC RIAGIDRTEL IKDRIDREEV LKYMINNNIN GIKNVGKIIL SYQENPEKVM SKIG
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