Gene Maeo_1101 details

Gene Information

• Locus tag: Maeo_1101
• Symbol: rps13p
• ID: 5327343
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: -
• Start bp: 1145401
• End bp: 1145850
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640788498
• Product: 30S ribosomal protein S13P
• Protein accession: YP_001325290
• Protein GI: 150401524
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0099] Ribosomal protein S13
• TIGRFAM ID: [TIGR03629] archaeal ribosomal protein S13P

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGACCCAAC CAGAATTCAG ACACAGAATT AGAGTATCAA GAACAGACAT AACTGGTGAG 
TTTCCATTAG AATATGCTTT ACAAGATATT AAAGGTATCG GTAAAGCTAT GGCTAAAGCA 
ATATTGAGAA TAACAAAATT GGACGGAAAA CAACAAGCCG GACTTATGTC AGATGAAGAT 
GTTAAAAAAA TAGAAGATAT TTTAAATGAA CCTGCAAAAC ACGGAATCCC ATCATGGATG 
TTCAACAGAA AGAACGATGT ATATTCGGGA TTAAATAAAC ACTTAATCGA ATCAGATTTA 
ACAATGGCTG TTCAAGAAGA CATTGCTACA ATGAAAAAGA TAAGATGTTA TAGAGGAATT 
AGGCATGAAT TAGGATTGCC ATGTAGAGGA CAAAGAACAA GAGGTTCATT TAGGAAAGGT 
TCTCTTGTAG GTGTTAAGAG AAGAAAATAA 

 

Protein sequence

MTQPEFRHRI RVSRTDITGE FPLEYALQDI KGIGKAMAKA ILRITKLDGK QQAGLMSDED 
VKKIEDILNE PAKHGIPSWM FNRKNDVYSG LNKHLIESDL TMAVQEDIAT MKKIRCYRGI 
RHELGLPCRG QRTRGSFRKG SLVGVKRRK