Gene Maeo_1100 details

Gene Information

• Locus tag: Maeo_1100
• Symbol: rps4p
• ID: 5327744
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus aeolicus Nankai-3
• Kingdom: Archaea
• Replicon accession: NC_009635
• Strand: -
• Start bp: 1144779
• End bp: 1145312
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640788497
• Product: 30S ribosomal protein S4P
• Protein accession: YP_001325289
• Protein GI: 150401523
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0522] Ribosomal protein S4 and related proteins
• TIGRFAM ID: [TIGR01018] ribosomal protein S4(archaeal type)/S9(eukaryote cytosolic type)

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGGAGACC CAAGAAGGTT AAGCAAAACA TACGACACAC CTAACCACCC ATGGATTGGA 
GAGAGAATCA AACAAGAAAG GGAACTCTCC AATAAATATG GTTTGTCAAA CAAAAAAGAA 
ATCTGGAAAA TGGAAACAAG ATTGAGAACA TTCAGAAGAC AGGCAAGAAA GTTAATCAGC 
GATACCTCTG CTCAAGGGGA AAAAGAAGCT GTTCAATTAT TCGGTATCTT AAATAGATAC 
GGTATCTTAT TAAAAGAAGA TGCTACGCTG GATGATGTTT TGTCTTTGAA TTTAGAAAGT 
ATCTTGGAAA GAAGATTGCA AACATTGGTA TTTAGGAAGG GATTGGCCAA TACACCAAAA 
CAGGCAAGAC AATTTATTGT TCATGGCCAC ATCGCAGTAA ATGGAAAGAA AATAAATGCT 
CCAAGTTATC TTGTTCCTTT GGTTGAGGAA GATGCTATAT CTTATATGCC AAATTCCCCA 
ATGGCATCTG AAAGTCATCC AGAAAGAACA GATTCAGTAA AGGACGCGGA ATAA 

 

Protein sequence

MGDPRRLSKT YDTPNHPWIG ERIKQERELS NKYGLSNKKE IWKMETRLRT FRRQARKLIS 
DTSAQGEKEA VQLFGILNRY GILLKEDATL DDVLSLNLES ILERRLQTLV FRKGLANTPK 
QARQFIVHGH IAVNGKKINA PSYLVPLVEE DAISYMPNSP MASESHPERT DSVKDAE