| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1056 |
|---|
| Symbol | |
|---|
| ID | 5326581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 1090829 |
|---|
| End bp | 1092019 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640788453 |
|---|
| Product | major facilitator transporter |
|---|
| Protein accession | YP_001325246 |
|---|
| Protein GI | 150401480 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.0999083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAACC CCAAAAAACC CAAAAAAGAA TATTTTGGAA TTGATAAAGA TGTTTTATTA
CTTACCACAG TTAGTTTTAT AAATGATTTA AGTAGTGAAA TGATTATGCC AATTCTTCCA
TTATTTATAA CTTCATTGGG GGGTTCAAGT GTAGTTGTTG GTCTAATAGG GGGATTAAAA
GATAGTATAT CAAGTATTTT AAAGGTAATA TCTGGATATT ATTCTGATAA AACAGGCAGG
AGAAAAGTTT TTGTTTTTGC AGGTTATTTA ACCTCATCCA TTTTTAAATT ATTACTTTCA
TTTTCAACTA CTTGGTTTGG AGTTTTATTT TTTTCGGCAT TTGAAAGGGT TGGAAAAGGT
GTAAGAACAG CCCCACGAGA TGCCATTATA TCAGATTTAA TGGCCGAAAA AAGAGGAATG
GGATTTGGAA TTCAACGGGC AGGAGATACA TTTGGGGCAA TACTTGGGTC TGTGGGCGTA
CTCATACTTT TCTGGTACTT ATATTATGAT TTTAGGGAAA TTATATTAAT ATCGGCGTCC
CTTTCATTTT TAGCACTGGT TCCTCTTTAT TTTCTTAAAG AGAAAAAAAA GATTAAAAGG
CAAAATTTAT CGCTAAAAAT AGGTTTAAAA AATTTATCAA CTCCATTAAA ACTATTTATA
TTGATATCTG GTATATTTAC ATTGGCCAAT TTTAGTTATA TGTTTTATAT CCTAAAAGCC
CAGACAATTT TTACTGGTCG GTTGGCTATC GGAGCTCCCA TAATATTATA TATTTTGTTT
AATATATTTT ATGGCATATT TGCTCTTCCT TTTGGAGTTC TTTCGGATAA AATAGGGAGA
AAAAAAGTTA TTATTTTTGG ATACCTCATA TATGCCATAA CTGCCTTTGG ATTTGCATTA
TTTAATTCTT TAAATTATTT CATAATATTA TTTGCACTAT ATGGAATATC CTATGCCATA
ATTGAAGGAA ACCAGAGAGC TTATGTATCC GATTTATCAT CAGAATATAT AAGGGGAACT
GCATTGGGAA CATTTCATAC CATTGTTGGT TTAATGGCAT TGCCTTCAAG TTTAATAGCT
GGGTATTTAT GGAGTATCGA CCCCAACATA CCTTTTATAT ATGGGGGAAT TGTGGCATTA
ATTTCAAGCA TGTTATTTAT AATATTTGCA ATAAAGTTTA AGTTAAGTTA A
|
|---|
| Protein sequence | MNNPKKPKKE YFGIDKDVLL LTTVSFINDL SSEMIMPILP LFITSLGGSS VVVGLIGGLK
DSISSILKVI SGYYSDKTGR RKVFVFAGYL TSSIFKLLLS FSTTWFGVLF FSAFERVGKG
VRTAPRDAII SDLMAEKRGM GFGIQRAGDT FGAILGSVGV LILFWYLYYD FREIILISAS
LSFLALVPLY FLKEKKKIKR QNLSLKIGLK NLSTPLKLFI LISGIFTLAN FSYMFYILKA
QTIFTGRLAI GAPIILYILF NIFYGIFALP FGVLSDKIGR KKVIIFGYLI YAITAFGFAL
FNSLNYFIIL FALYGISYAI IEGNQRAYVS DLSSEYIRGT ALGTFHTIVG LMALPSSLIA
GYLWSIDPNI PFIYGGIVAL ISSMLFIIFA IKFKLS
|
|---|
| |