| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_1047 |
|---|
| Symbol | |
|---|
| ID | 5327143 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 1080252 |
|---|
| End bp | 1081532 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640788444 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001325237 |
|---|
| Protein GI | 150401471 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1782] Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTG TTAGATTTCA CGGAGGATGT CACCAAATTG GTATGTCCTG TGTGGAAATT
GATACAAAAA AATCAAAAAT ACTTGTAGAT TGTGGTATGA ATCCATCGGA TAATTCATTA
CCAAAAATTA ATCCAAATGA TATTGATGCC GTTGTGGTGT CACATTCTCA TTTAGACCAT
TGTGGAGCGG TTCCTTATTT TAATTTTAAA AATCCGATTT ATTCCACAAT ACCAAGTGTT
GATTTAATGT ATATTTTATG GAAAGATATT TCAAAATTAT CAAAAACATA CCCTGAAGAG
AATATACAAA AGGCTATGAA TAATATAAAG GCAGTAAATT ACAGAGAGCC TAAAAAAATC
ACCAGCGATA TTACAATGAG GTTGTATGAT GCTGGGCATA TATTGGGGAG CTCCTCTGTA
TATTTGGACA TAGGCGGTAA AAAACTACTA TATACTGGAG ATATCAACGA AATAGAAACC
AGAACGCTAA AATCAGCCGA CACAGATATT GATGAAATTG ATACCCTTAT AATTGAATCT
ACCTACGGAG CTCCAACAGA TATAAAACCA TCTAGAAAGG CACTCGAAAA ACAACTTATT
GATGAAATAT CTGCCACCAT AGAAAAAGGA GGCAAGGTAA TTATTCCAGT TTTTGCTGTG
GGGCGGTCTC AGGAGATTAT AGCGGTATTG CATAATTATA TGAGGAGTAA ATTATTAAAA
AGAGTTCCCA TATATGTTGA AGGCTCTTTG GTGCATACCA CAGGAATATA TATGAGCCAT
TCAGAATGGT TAAATCCTAA AATAAGAAAC AACCTTGAAA ATAGGATAAA TCCATTTGGA
GATGTCACCA TTGTAAATAA AGAAAATAGT AGTGAAATAT ATAATAAGGA ACCATGCATT
ATAATTTCTA CCTCTGGAAT GGTGCAAGGA GGCCCCATAT TACAATATTT AAAACTTCTA
AAAAGTCCAA AAAATAAAAT AATATTAACA GGGTTCCAAG CAGAAGAGAC ACTGGGAAGA
CAGCTTGAAG ACGGGGCAGA GGAAATAACT CCATTTAGGA ATAAAATTCC AGTAAGGGGC
GAAGTTGTAA AAGTGGAATT TTCGGCCCAC AGTGATTATA ATTCATTAAT AAGATATATG
AAGAAAATAC CAAAACCTAA AAAAGTATTT GTAATGCATG GTGAAAGATA TCAATCTTTA
TCATTTGCCA TGACAATTTG GAAAAACTTT AAAATTCCAG CTATCGCTCC AACGGCGGGT
AGTATATTAC CTTTATTTTA A
|
|---|
| Protein sequence | MTIVRFHGGC HQIGMSCVEI DTKKSKILVD CGMNPSDNSL PKINPNDIDA VVVSHSHLDH
CGAVPYFNFK NPIYSTIPSV DLMYILWKDI SKLSKTYPEE NIQKAMNNIK AVNYREPKKI
TSDITMRLYD AGHILGSSSV YLDIGGKKLL YTGDINEIET RTLKSADTDI DEIDTLIIES
TYGAPTDIKP SRKALEKQLI DEISATIEKG GKVIIPVFAV GRSQEIIAVL HNYMRSKLLK
RVPIYVEGSL VHTTGIYMSH SEWLNPKIRN NLENRINPFG DVTIVNKENS SEIYNKEPCI
IISTSGMVQG GPILQYLKLL KSPKNKIILT GFQAEETLGR QLEDGAEEIT PFRNKIPVRG
EVVKVEFSAH SDYNSLIRYM KKIPKPKKVF VMHGERYQSL SFAMTIWKNF KIPAIAPTAG
SILPLF
|
|---|
| |