| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0858 |
|---|
| Symbol | |
|---|
| ID | 5327357 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | - |
|---|
| Start bp | 885302 |
|---|
| End bp | 886951 |
|---|
| Gene Length | 1650 bp |
|---|
| Protein Length | 549 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640788254 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001325052 |
|---|
| Protein GI | 150401286 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0218323 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGTTA AAGTAAATAA TTTATCTAAA TATTATGGTA AAAAAAAGGT GCTCGATAAC
ATAAGTTTTG AAGCTAAAAA AGGAGAAATT GTTGGAATAA TTGGAAAATC AGGGGCTGGA
AAATCTACAA TAATTAAAAT ATTGAGAGGA ACAGACAAAG AATACGAAGG GGAAATTGAA
ATATGCGGTA AAAAAGAAAA TTTACGAGAG ATTACTGCAA TACACATACA AAGGAATTTT
GCACTATGGG CCGAACCTGC CATATACAAT ATAATTAGGA AATTATATGC CATAAGAACT
AACTCATATA ATGAGGAGCT CCCTATGGAA GAGGAGTGGG AAGAATACGA AAAAACTGCA
ACAGAAATAT TAAAACTTGT TGGATTGGAG CATAAAAAAA ATGCCTATTC AAATATATTA
AGTGGAGGAG AAAAGCAACG GCTTATAATG GGAAGACAAA TAGCAAAAAT ATACGAAAAA
GGAGAGGGGG TTTTATTACT TGATGAACCT GCTACAATGT CATGCCCTGC TTCAAAACAG
GCTTTATTAG AAGTTTTAAA AAATATCAAT GATAAATTAA ATATTACAAT TATTATTACT
TCCCATCTTC CAGAAATACA TGAATATCTA TGTGATAGAT GTATATTATT AGAAAATGGT
AGGGTGAAAA TGGAGGGAGC TCCCAACCAA ATAATAAATG AGTTTTTAAA AGATATGCCT
GAACCAGAGC AAAATATGGG AGCACCCAAA GATAACAACG AAATAGAAGT AAATAACATA
TCAAAAAGAT ATTTTGTAGT TAATGGGGGA GAAACACTAA ATTTAAAGGA TATATCATTT
AGCGTAAAAG AACAAGAAAT CTTATCAATT ATTGGTCCAA GTGGAACAGG TAAATCTGTA
TTGTTAAGAT TACTGGCAGG TTTGGAAGTC CCCGATAATG GAACAATTAC CATTGATGGC
GTTGATTTAA CGGATTATGG TTGGGAGAGA GTGCAATTAA GAAGAAAAAT AGGAATTATG
CACCAAGAAT TCTCATTAAC CCATTACTTA ACAGTAGAAC AGCTGTTAAA ATACAGGCAA
GGAATTAAGG GAGAAGGTGC CATATCAAAT GCAAAATTAA AATCTGCGGA GTTAAATATA
TCTCCTAAAA CAGTAGATGC TATTTATCAG CTTATAGATT TACCAGAAGC AGAGATGAAA
AATAAACTTG AAAAATTAGG AATATCAGAG GATATTGTAA AACTATTATT CCCTGCTGTT
GTCGATGATT TCCATCCCAA AGAAGTTTTA AGTGCTCTTG ATTTAGATGA AGAAATATTA
AAAAAGACAC CAATGGAATT AAGCGGAGGA GAACGGGTAA GGGTGGCATT AGCTTTACAA
ATTATATCAA AGCCAAAAAT ATTATTACTT GATGAACCAT TTGGAGATTT AGACCCGATT
ACATTGCGGG AGGTTTCTAA TTACTTAAAG AAAATAAATA ATAAATTTGG AACTACCATA
GTTGTAATAA GCCACCATAT AGAACTTATA AAAGAAATAA GTCATAGGGC AATATTAATT
GATGAAAATA AATTAATCGG CGATGGAGCT CCCGAAAAAA TTTGTAATGA ATTTATAGAA
AGAAGTTGCT CTAAATTTTT GGGGCAATAA
|
|---|
| Protein sequence | MTVKVNNLSK YYGKKKVLDN ISFEAKKGEI VGIIGKSGAG KSTIIKILRG TDKEYEGEIE
ICGKKENLRE ITAIHIQRNF ALWAEPAIYN IIRKLYAIRT NSYNEELPME EEWEEYEKTA
TEILKLVGLE HKKNAYSNIL SGGEKQRLIM GRQIAKIYEK GEGVLLLDEP ATMSCPASKQ
ALLEVLKNIN DKLNITIIIT SHLPEIHEYL CDRCILLENG RVKMEGAPNQ IINEFLKDMP
EPEQNMGAPK DNNEIEVNNI SKRYFVVNGG ETLNLKDISF SVKEQEILSI IGPSGTGKSV
LLRLLAGLEV PDNGTITIDG VDLTDYGWER VQLRRKIGIM HQEFSLTHYL TVEQLLKYRQ
GIKGEGAISN AKLKSAELNI SPKTVDAIYQ LIDLPEAEMK NKLEKLGISE DIVKLLFPAV
VDDFHPKEVL SALDLDEEIL KKTPMELSGG ERVRVALALQ IISKPKILLL DEPFGDLDPI
TLREVSNYLK KINNKFGTTI VVISHHIELI KEISHRAILI DENKLIGDGA PEKICNEFIE
RSCSKFLGQ
|
|---|
| |