| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0789 |
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| Symbol | |
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| ID | 5327094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | - |
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| Start bp | 812798 |
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| End bp | 815464 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640788180 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001324984 |
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| Protein GI | 150401218 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.804481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT ATGACATTCC AAAAGAAATC GGGGGAATAG TATTTGGTTT ATTATCTCCA
GAATATATCC GAAAAATTTC AGTAGCGAAA ATTGTAACTG CTGATACTTA TGATGATGAT
GGATACCCCA TAGATGGAGG TTTAATGGAT ACTAGATTGG GAGTAATAGA TCCGGGTCTT
GTATGTAAAA CCTGCGGGGG AAGGGTAGGA ACATGCCCTG GTCATTTTGG ACATATTGAG
TTATCAAAAC CTGCTGTCCA TATCGGGTAT GCAAAAGACA TATACAAAAT ACTAAAGGCT
GTATGTCCGC ACTGTGGAAA GGTGGCTTTA AGTGAAACCA GAAGAATGGA ATACCTTAAA
AAAATGGAAA CTTTAGAAGA AGAAGGCGGA GATAAATGGC AATTGGCTGA CGATGTGTTA
AAAGAAGGGG CCGGAAAAGA TATCTGCCCG TACTGTGGCG AAACTAAATA TGATATAAAA
TATTCTAAAC CAACGGCTTA TTTGCAGATA GAAGGAAAAA CCCAAAAACA ACTGATGTCT
TCAGAAGTTA GAGAAATTCT AGAAAAAATA CCTGATGAAG ATTGTATGTT AATAGGTGTT
AATCCAGAAG TAGCAAGACC TGAATGGATG ATTTTAACAA GCCTACCTGT GCCACCAGTT
ACAGTTAGGC CTTCTATTAC GCTTGAAAGT GGGGAACGAA GTGAGGACGA TTTAACCCAT
AAATTAGTTG ATATTATCAG AATTAACCAG AGGTTAGACG AAAATATTGA GGGAGGAGCT
CCTAACTTAA TTATTGAAGA CCTTTGGGAT TTATTACAAT ACCACATAAA TACCTACTTT
GATAATGAAG CACCTGGAAC ACCTCCCGCA CGACATAGAA GTGGAAGACC GCTCAGAACT
ATTGCTCAAA GGTTAAAAGG TAAAGAAGGT AGATTTAGGC ATAATCTTGC AGGTAAAAGG
GTAAATTTCT CAGCAAGGAC CGTTATTTCG CCCGACCCAA GATTAAGTAT AAATGAAGTA
GGTATTCCAA AGCAAATAGC AAAAGAATTA ACCATTCCTG AGAAGGTCAC AAAATACAAT
ATTGATAAAA TAAGGGAGCT CATAGCAAAT GGTGCAGATA ATCACCCTGG TGTTAACTAT
CTTATCAAAA AAGTAAAGAC AAGAGATGGA AAGGAAGAAG AATATAAAAT AAAAATAACT
GATAAAGTTA AAGAACTTTG GTCGGAAAAA GTGGAAGAAG GAATGATTGT CGAGAGACAT
TTAATTGATG GAGATATTGT ATTATATAAC AGGCAACCTT CATTACACAG AATGTCAATT
ATGGCACACC GGGTAAAAGT TTTGCCGTAT AGGACATTTA GACACAATCT TTGTGTATGT
CCGCCTTACA ATGCTGACTT CGATGGAGAT GAAATGAACA TACATGTTCC TCAATCAGAA
GAGGCTAGAG CAGAGGCTGA GGCAATAATG CTTGTAGAAA ATCATATTGT TTCTCCCAGA
TATGGTGGTC CAATTATTGG GGCAATTCAC GATTTCATAT CCGGGGCATA TGTGTTAACA
AGTTCCTACT TTACAAAAGA TGAAGCTTCA ATATTGTTAA GAAGTGCCAA TCTTGAAATG
GATTTGGGAG CTCCTGATAA AATTGAAGAT GGAGTAGAAT TATACAGCGG AAGAACACTA
TTTTCTAAAA CACTTCCTAA GGAATTAACT CTAAAATATA GGGCAAAAAC TTGTAAAAAA
TGTGAAATTT GTGAAAAAGA AGACTGCCCT CATGATTCCT ATGTGGTAAT AATAAATGGG
GAGCTCCTGA AAGGAGTTAT TGATAAAAAT GGATATGGTT CTGAGGCAGG AATTATATTA
AATACCCTAG TTAAAGAATT TGGTTCAGAA CAAGCAAGAA TATTCCTTGA TACTTCAACA
AAAATGTCCA TAAAATCCAT GATGATAAAA GGTTTTACAA CTGGTATTGA CGATGAAGAT
ATTTCAGAAG AGTCTGTTGA GGAAATAAAG GCGACTTTGG ATAAAGCAGA AAAAGAAGTT
GAAGAAATAA TTAAAGAATA TGAAAACGGA ACACTTGAAT TACTGCCTGG AAGAAGCCCA
GAAGAATCAA GGGAAGCATA TATTATGCAG GTATTGGGTA AGGCTAGGGA TGATGCAGGT
AAGGTTGCTG AACGAAATTT AAGTAAAACA AACCATGCAG CAGTAATGGC AAGGACCGGT
GCAAGAGGTT CATTGTTGAA TATTACAATG ATGGCCGGTT GTGTTGGTCA GCAGGCAGTT
AGGGGAGGAA GAATATTTAG GGGATACAGA GATAGAACGC TACCTCACTT CGAAAAAGGA
AGTTTATCCG CAGAATCCCA CGGTTTCGTT AGGAGTTGCT ATAAAACAGG TATGACGCCC
ACAGAATACT TCTTCCACGC CATGGGGGGA AGAGAAGGAT TAGTGGACCA GGCTGTTAGG
ACGGCACAAT CTGGATACAT GCAAAGAAGA TTGGTAAATG CTCTTCAAGA CCTAAAAGTA
GAATATGATA CATCTGTAAG AGATTCAAAA GGGATGATTG TTCAATTTAC CTACGGGGAT
GATGGAGTAG ACCCTGCAAA GGCCGACCAT GGAAAATCTG TGGATTTAGA CAAAATATTT
ACAAAAGTTA AGTCAAAATA TGAATAA
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| Protein sequence | MDRYDIPKEI GGIVFGLLSP EYIRKISVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL
VCKTCGGRVG TCPGHFGHIE LSKPAVHIGY AKDIYKILKA VCPHCGKVAL SETRRMEYLK
KMETLEEEGG DKWQLADDVL KEGAGKDICP YCGETKYDIK YSKPTAYLQI EGKTQKQLMS
SEVREILEKI PDEDCMLIGV NPEVARPEWM ILTSLPVPPV TVRPSITLES GERSEDDLTH
KLVDIIRINQ RLDENIEGGA PNLIIEDLWD LLQYHINTYF DNEAPGTPPA RHRSGRPLRT
IAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPKQIAKEL TIPEKVTKYN
IDKIRELIAN GADNHPGVNY LIKKVKTRDG KEEEYKIKIT DKVKELWSEK VEEGMIVERH
LIDGDIVLYN RQPSLHRMSI MAHRVKVLPY RTFRHNLCVC PPYNADFDGD EMNIHVPQSE
EARAEAEAIM LVENHIVSPR YGGPIIGAIH DFISGAYVLT SSYFTKDEAS ILLRSANLEM
DLGAPDKIED GVELYSGRTL FSKTLPKELT LKYRAKTCKK CEICEKEDCP HDSYVVIING
ELLKGVIDKN GYGSEAGIIL NTLVKEFGSE QARIFLDTST KMSIKSMMIK GFTTGIDDED
ISEESVEEIK ATLDKAEKEV EEIIKEYENG TLELLPGRSP EESREAYIMQ VLGKARDDAG
KVAERNLSKT NHAAVMARTG ARGSLLNITM MAGCVGQQAV RGGRIFRGYR DRTLPHFEKG
SLSAESHGFV RSCYKTGMTP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDLKV
EYDTSVRDSK GMIVQFTYGD DGVDPAKADH GKSVDLDKIF TKVKSKYE
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