| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0600 |
|---|
| Symbol | |
|---|
| ID | 5326385 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 614560 |
|---|
| End bp | 615504 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640787991 |
|---|
| Product | uroporphyrinogen decarboxylase |
|---|
| Protein accession | YP_001324797 |
|---|
| Protein GI | 150401031 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATTGACA TTGAAGAAGA AGTTAAAAAT AGAACTTTGA TAGCACCAAT GGGTGGGTGT
TATATTGCAA AACTTTATGG ATGCGGTAAG AAGCACCATT TTTGTAGAAA TGGGGAAATT
TTTGGTAAAG CACTTTGTAA GGCAAAGGAA CATTTTGGCC ATGATATTAT CCATCTTTCC
TCAGATATAT ATGTTGAAGT GGAAGCCATG GGATTGTACG ATTGGAGCTG TATATCTGAG
GGCTATGGGA AGATGGATGA AGATTTTGAT TTGGATAGTT TAACGATTGA TTTAGATGGT
GGGAGAATTC CCGAATACAG AAAGGCAATT GAATACTGCA ACTCAAAAAA TAATACGGCA
TTTGTAAGCG TAAGTGCCCC ATTTACTCTT GCAGCAATTC TGAGAGGCAT TGATAGATTT
ATGATAGATT TAATAAAAAA TGAAAAATTT GCTAAGGATT TGATTAAAAA AACTACAGAG
ATATCCAAAA TTGTTATAGA AGATATAAAT GAGATTGCAC ACCCTTTTGT TGTTGATGCG
GTGTCATCTT CCTCCCTTAT TAGTCCAGAA TTTTATAGAA AATTTGCTTT TAAACCGATA
AAAAAAGTAA TGAAGGCATG TGATTTTCCC ATCTTACACA TGTGTGGAGA CATAAACCCA
ATATTAGATG ATGTTAAAAA AACAGGAACA AAAATTATAA GCTTTGATGA TAATTTAGAT
ATTTCTAAAG CCTTTGAGGC ATTTAAAGAC TTAATTGTTT TTGGAAATAT TGACCCTTCA
ATGATGTATT ATTCAAAAGT AGATAAAGTA GAAATGGAAG TAAAGAAATG TATGGAAGCT
AAGGGTGGTG ATTTCATATT GTCCACTGGA TGTAGCCTCC CAGTGGGAGC TCCAAAGAAA
AATTTAGAGG CGTTAGTGCA TTATGGGGGG TGTTATGATG TATAA
|
|---|
| Protein sequence | MIDIEEEVKN RTLIAPMGGC YIAKLYGCGK KHHFCRNGEI FGKALCKAKE HFGHDIIHLS
SDIYVEVEAM GLYDWSCISE GYGKMDEDFD LDSLTIDLDG GRIPEYRKAI EYCNSKNNTA
FVSVSAPFTL AAILRGIDRF MIDLIKNEKF AKDLIKKTTE ISKIVIEDIN EIAHPFVVDA
VSSSSLISPE FYRKFAFKPI KKVMKACDFP ILHMCGDINP ILDDVKKTGT KIISFDDNLD
ISKAFEAFKD LIVFGNIDPS MMYYSKVDKV EMEVKKCMEA KGGDFILSTG CSLPVGAPKK
NLEALVHYGG CYDV
|
|---|
| |