Gene Maeo_0593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0593 
Symbol 
ID5326810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand- 
Start bp609211 
End bp609771 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content30% 
IMG OID640787984 
Productputative RNA-processing protein 
Protein accessionYP_001324790 
Protein GI150401024 
COG category[R] General function prediction only 
COG ID[COG1094] Predicted RNA-binding protein (contains KH domains) 
TIGRFAM ID[TIGR03665] arCOG04150 universal archaeal KH domain protein 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.459643 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACAG CTATGAATGT TGAAGTTTTA AAAATTCCAA AAGAAAGAAT TGGAGTTATA 
GTAGGAAAAG GCGGAGAAAT TAAAAATAGA ATAGAAAAAG AATTAAAAGT AGAAATTGAT 
ATTGAAGAAG ATGGAGAAAT AACAATATTT TCCACAAAAG AACAGGAAGA CCCACTGGCA 
ACTTGGAAAG CAAGGGACAT AATAAAGGCA ATAGGCAGGG GATTTAATCC TGAAAAATCA 
TTAAAATTAA TTTCTGATGA TTATATTATT GAAATAATAG ATATTACAGA ACATGCCAGT 
TCAGATAATG CTGTCAAAAG ATTAAAGGGA AGAGTAATCG GAAGTGGTGG AAAATCCAGA 
AGATATATTG AAGAATTAAC TGATACAGAT GTATCTGTTT ATGGAAAAAC AATTGCCGTA 
TTGGGAGATT ATGAATCTGT TCAAATAGCA AAAGAAGCCA TAAATATGAT ATTAAGGGGA 
AATTCTCACT CTAAAATGTA TAAATACCTT GAAAGACATA GGCAAGATAT TAAAAGAAAA 
GAATTGGAAC TTTGGAAATA A
 
Protein sequence
MDTAMNVEVL KIPKERIGVI VGKGGEIKNR IEKELKVEID IEEDGEITIF STKEQEDPLA 
TWKARDIIKA IGRGFNPEKS LKLISDDYII EIIDITEHAS SDNAVKRLKG RVIGSGGKSR 
RYIEELTDTD VSVYGKTIAV LGDYESVQIA KEAINMILRG NSHSKMYKYL ERHRQDIKRK 
ELELWK