Gene Maeo_0437 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0437 
Symbol 
ID5327208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp456217 
End bp457476 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content33% 
IMG OID640787828 
Productpeptide chain release factor 1 
Protein accessionYP_001324635 
Protein GI150400869 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1503] Peptide chain release factor 1 (eRF1) 
TIGRFAM ID[TIGR00108] peptide chain release factor eRF/aRF, subunit 1
[TIGR03676] peptide chain release factor 1, archaeal and eukaryotic forms 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.53256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTAATT CCTCAACAGA GACATATTTA TTCAAAAAAG CTCTAAAAGA ATTAAAAGAT 
AAAAAAGGAA AAGGGACAGA ATTAATTAGT TTGTATATTC CGAAAGGAAA GAGAATTTCA
GATGTAAGTC AGCATTTAAG GGAAGAAATA TCCCAATCAG CTAACATCAA AAGTAAAACC
ACTAAAAAAA ATGTCCAGTC GGCAATTGAA GTAATATTGC AAAGATTAAA ATTATTAAAA
GAACCACTTG AAAAAGGAGT AATTATATTT GCAGGAATGA TTCCAAGAGG TGGTCCAGGA
ACAGAAAAAA TGGAGACCTA TGTTTTAGAA CCGCCTGAAC CTGTGAAAAC ATATATTTAT
AGATGCGATT CTCAATTTTA TACCGAACCA TTGGAAGACT TTATGGCAGA TAAAGATATT
TATGGAGTAA TTCTTGTAGA TAGAAATGAA GCCACAATCG GAATAGTAAA AGGAAACAGC
ATATCCATTG TTAAAAGATT AACAAGTGGA GTTCCAGGTA AGTTTAAAGC AGGAGGGCAG
TCAGCTCGAA GGTTGGAGCG ATTAATTGAT GATGCTGCAC ACCATTTTAT GGTTAGAATT
GGAGAATATT CCAATGAGAT ATTCCTTCCA TTATTGGAGG AGAAAAAATT AAGCGGATTA
TTGTTGGGCG GTCCTGGAAA TACAAAAAAT GAATTTGCAG AAAAAGGATA TTTACACCAC
CAGTTAAAGC AAAAAATAAT TGAAACTTTT GATTTATGTT ATACGGAAGA AAGTGGTGTC
AGGGAGCTCC TTGATAAAGC TTCAACTTTA TTGAGGGATT TAGATTTAAT GAAGGAAAAA
GAGGTAGTTC AGAGGTTCTT TAAGGAGCTT GTAAAAGAGG ACGGAGGACT TGCCGTATAT
GGTGAAAAAG AGGTAATGAA ATATCTTGAA ATGGGGGCAG TTGATACTCT TATTATCACA
GAAGGCATCA ATACTTCGCG AATTACTATA AAATGTAATA ATTGTGAATA TGTTGAAGAA
AAAACCGTAA AAAATGAGGA CATATTGAAA TTAGAAGAAA TATTAAAAAC AAAAACCTGT
CCCCGCTGTG AGGGGGCACT ATATATTGAC AGCGAAGAAG ATATCATTGA ATTCTATGCT
AGATTATGTG ATGAATCAAA TTCAACCTTA AAAATAATAT CTACTGATAC AGAGGAAGGA
CATCAAATTT TAAAGGCTTT TAAGGGCGTT TGTGCCATTG TAAGATATAG GGTAGATTAA
 
Protein sequence
MSNSSTETYL FKKALKELKD KKGKGTELIS LYIPKGKRIS DVSQHLREEI SQSANIKSKT 
TKKNVQSAIE VILQRLKLLK EPLEKGVIIF AGMIPRGGPG TEKMETYVLE PPEPVKTYIY
RCDSQFYTEP LEDFMADKDI YGVILVDRNE ATIGIVKGNS ISIVKRLTSG VPGKFKAGGQ
SARRLERLID DAAHHFMVRI GEYSNEIFLP LLEEKKLSGL LLGGPGNTKN EFAEKGYLHH
QLKQKIIETF DLCYTEESGV RELLDKASTL LRDLDLMKEK EVVQRFFKEL VKEDGGLAVY
GEKEVMKYLE MGAVDTLIIT EGINTSRITI KCNNCEYVEE KTVKNEDILK LEEILKTKTC
PRCEGALYID SEEDIIEFYA RLCDESNSTL KIISTDTEEG HQILKAFKGV CAIVRYRVD