Gene Maeo_0422 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMaeo_0422 
Symbol 
ID5326876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus aeolicus Nankai-3 
KingdomArchaea 
Replicon accessionNC_009635 
Strand
Start bp441423 
End bp442076 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content24% 
IMG OID640787813 
ProductHAD family hydrolase 
Protein accessionYP_001324620 
Protein GI150400854 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCCA TAATATTTGA TTTAGATAAT ACTCTTTATG ATTATAGGGA TTATTTCTAT 
CAAGTTTTTT TAAAATTATC AGAATATTTT TATAAAAGGT ACCAAATTCC AAAAGATGAA
TTTATTAAAA CATCAATGGA GATATTGAAC AAAAGAAAAA GCAGATATCC AAAATTATTC
AATGAAATAT TGAATGTATT AAACATTCCT GAAAACGAAG TTAAGTTTTG TGTTGAGATA
TTCACTAGTG GAAGATTTCC AATAGTTCCA TCTGATGGAG TTTATGAAGT GTTAGATTAT
CTAAAAAACA AAAATTATTT TTTAGGCATA ATTACTGATG GAAACCATAT ACGTCAAAGA
GAAAAAATAA AATCCTTAAA ATTTGAAAAT TATTTTGATA CTGTTGTTTA TACAGATATT
TTTCAATCTC CAAAACCTTC CCCAACACCT TACCAATATA TAATTAGTAA ATTTGGTATT
AATCCAAAAT TATCATATTA TGTTGGCGAT GACCCTGATG TTGATTTTAG AGGAGCAAAA
TTCGTTGGAT TAAATACTAT AAGGGTATTA AATGGAGAGT TTATATATAA AAAGAAAAAT
AAATTTATAG ATTACGAAAT AAAGGAAATA AAGGAAATAA TTAACATAGT GTAA
 
Protein sequence
MKAIIFDLDN TLYDYRDYFY QVFLKLSEYF YKRYQIPKDE FIKTSMEILN KRKSRYPKLF 
NEILNVLNIP ENEVKFCVEI FTSGRFPIVP SDGVYEVLDY LKNKNYFLGI ITDGNHIRQR
EKIKSLKFEN YFDTVVYTDI FQSPKPSPTP YQYIISKFGI NPKLSYYVGD DPDVDFRGAK
FVGLNTIRVL NGEFIYKKKN KFIDYEIKEI KEIINIV