| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0370 |
|---|
| Symbol | |
|---|
| ID | 5327583 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 383988 |
|---|
| End bp | 384449 |
|---|
| Gene Length | 462 bp |
|---|
| Protein Length | 153 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640787762 |
|---|
| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
|---|
| Protein accession | YP_001324569 |
|---|
| Protein GI | 150400803 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3260] Ni,Fe-hydrogenase III small subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.898351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG AGTTTTTTAG AAAACGGTCA ATAAACCTCT GTATAGTAAA TACTGGTGGT
TGCAATGGTT GCGATATAGA ACTTGTATCC ACACTTGCAC CTCGGTATGA TATAGAACAA
TACGGTGTTT ATGTCCATAA CAATCCACGG GAGGCCGATA TATTAGTAAT CACTGGACCA
GTTACTCTCC CATGGAAAGA TAAACTTGTA GAAATATATG AAAAAACACC AGAACCAAAA
ATTGTGGTGG CAGTTGGTGC CTGTGCATTA AGTGGCGGGA TATTTAAAGA GGGCCATATA
TATGGTCCAG TTGATAAATT TATTCCTGTT GATGCTAAAA TTGTAGGTTG CCCCCCAAGA
CCTTCTGAAA TTATTGAAGC AGTGCTAAAA GTGGCACCCG ATGCCCTTGC AGCAAAAGGA
ATAGCTCTTA AAAATGCTAA CAAAGTAGCA AATGTAGAGT AG
|
|---|
| Protein sequence | MIKEFFRKRS INLCIVNTGG CNGCDIELVS TLAPRYDIEQ YGVYVHNNPR EADILVITGP
VTLPWKDKLV EIYEKTPEPK IVVAVGACAL SGGIFKEGHI YGPVDKFIPV DAKIVGCPPR
PSEIIEAVLK VAPDALAAKG IALKNANKVA NVE
|
|---|
| |