| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0345 |
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| Symbol | |
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| ID | 5327580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | - |
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| Start bp | 365422 |
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| End bp | 367377 |
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| Gene Length | 1956 bp |
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| Protein Length | 651 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640787737 |
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| Product | replication factor A |
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| Protein accession | YP_001324544 |
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| Protein GI | 150400778 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1599] Single-stranded DNA-binding replication protein A (RPA), large (70 kD) subunit and related ssDNA-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.234694 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATATTG ATAAAATAAA ACAAAAAATA CTAGAAAAAA TATCCGAAGA GGAATTGGCT
AAAGAAATAG ACAGTATAAT CCAAGAACAT GGCGGATTAA TCGGAGAAGA CGCCGCAATT
AATACAATAG CAAGGGACAT TGGGATTAAT ATTGAAGAAG AATATGATGA GGAAGAATGT
AAATTTTTAA TTAAAGATAT CTCCGAAGGA CAGTCAAATG TGGAAATAAC AGCAAAAATT
ATAGATATGA CTGATTTAAG AGAATTTAAT AAAAAAGATG GCACAACTGG GACTGTTAGA
AGTATAGTTA TTGCAGATAA TACGGGCTCC ATTAGATTAA CTCTTTGGAA TGATAAAGCC
AACATAGTAG ATAACTTGGA AATAAGAGAT GTAATAGAAA TAACAGGTGC CTTTTCAAGA
CAATGGAACA ATAGAATTGA ATTAAATAGT GGTTCCGATA CAAAAATTGA AAAAATAGAA
ATAGGAGATT ATGACGAATC CATGTATCCC ATAGTAAAAG ATTATTATAA AATAGGGGAG
CTCCAAGCAA ATAATCCTGC CACAATTAAG GGGGAGATTA CAATATGCTA TGCCGTAAGA
GAATTTCCAA AAAGAAACGG CGAAACCGGT AGAGTAAAAT CATTTATATT AAAAGACGAA
ACTGGCACAA TTAGGGGAAC CCTTTGGGAC GATAACACCG AAATAAACCT AAATAAAGGT
GATATCGTAG AAGTAAAAGG AATGGTTAAA GAAGGATTTA GAGAGGGACT TGACATTAAT
GTAAATAATA TTAAAATTAT AGGAAAGGCA GAAGTTGAGG AAATTGAGGC AAAAGATGAA
ACCATTGAAA ATTTACCAAA TTGCAACGGG GAAATTGTAA ATGTAAAGGG AAGAATAATA
AATATATCAA ATCCAAAAAC CGTTAATTTT GGGGATAGGG ATGTGGAAGT TCAAGAAATT
ACAATTACAG ATAGCACTGG GACTATTGGT GTGGCTTTCT GGGGAAATGC CATGAATAAA
ATAAAAGAAG CTTCGATTAA AGAAGGAGAC GGAGTAAAAA TTACAAATTG TAAGGTAAAA
ACCTACGAAA ATTACGAAGG AAAAATTATA GCTTCTTTGT CTGCACAATA TGGCACTGAA
ATAATTAAAG ATGAAACTGT GGGAGCTCCC GAATATTCTG AAAATATTAT AAAAATAAAA
GATATATTTA GTTTAGATGA AGAAAAAAGG AATGATATTT CTGTAATTGG TAAGGTATCA
GATTTATACG ACCTTAGGAC ATTTGAAAGA AGAAATGGCT CAACTGGAAA AGTTAGAAGT
TTAATGTTAG AGGATGAAAC TGGTAAAATT AGATTAACTC TATGGGATAG TGATGCTGAA
TTAGAAATTA AAGAGGGAGA TGTAATAAAA GTAGTAAGGG GATATGTTAA AGAAAATGGG
GACTATTACG ACCTAAATAT TGGTAGAATT GGAAAATTAA TAATTAATCC AGAGGGAATA
TCCGTCGATA TAAAAACCAG TAGGAAATTT ATTAAGGAGC TCCAAGAGGA AGATACTACG
GAAATTAGGG GGGCTGTCGT AGATTACAGA AAACAAAATT TAGTGCTATA TTTATGTCCT
AATTGTAATA AAAGAGTGGC ATTAGTCGAA GGAGTTTATG ATTGTGAAGA ATGTGGAGAG
GTATCTCCAA AAGAATTAAT TACTGCAACT ATTACAGTGG ATGATGGAAC AAGCAACATA
TCTTGCAAAT TATATGGCTC TGCTGTGGCA AAATTAACAA ATACGCCACT AAATGAGTTA
AAAGATGCTA ATTTAGATAT TTTAGAAAAT ATATTGGGAA GTGAATTTGT ATTTTCTGGA
TTGGCTAAAA CTGGATATAA TGACCTTGAA TTCTCTGTAA GAAATGTAAA ATCTGTTGAT
TTAGATAAAG AAATTGAATT ATTAAAGGAA TTATAA
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| Protein sequence | MNIDKIKQKI LEKISEEELA KEIDSIIQEH GGLIGEDAAI NTIARDIGIN IEEEYDEEEC
KFLIKDISEG QSNVEITAKI IDMTDLREFN KKDGTTGTVR SIVIADNTGS IRLTLWNDKA
NIVDNLEIRD VIEITGAFSR QWNNRIELNS GSDTKIEKIE IGDYDESMYP IVKDYYKIGE
LQANNPATIK GEITICYAVR EFPKRNGETG RVKSFILKDE TGTIRGTLWD DNTEINLNKG
DIVEVKGMVK EGFREGLDIN VNNIKIIGKA EVEEIEAKDE TIENLPNCNG EIVNVKGRII
NISNPKTVNF GDRDVEVQEI TITDSTGTIG VAFWGNAMNK IKEASIKEGD GVKITNCKVK
TYENYEGKII ASLSAQYGTE IIKDETVGAP EYSENIIKIK DIFSLDEEKR NDISVIGKVS
DLYDLRTFER RNGSTGKVRS LMLEDETGKI RLTLWDSDAE LEIKEGDVIK VVRGYVKENG
DYYDLNIGRI GKLIINPEGI SVDIKTSRKF IKELQEEDTT EIRGAVVDYR KQNLVLYLCP
NCNKRVALVE GVYDCEECGE VSPKELITAT ITVDDGTSNI SCKLYGSAVA KLTNTPLNEL
KDANLDILEN ILGSEFVFSG LAKTGYNDLE FSVRNVKSVD LDKEIELLKE L
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