| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0287 |
|---|
| Symbol | |
|---|
| ID | 5326361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 309842 |
|---|
| End bp | 311437 |
|---|
| Gene Length | 1596 bp |
|---|
| Protein Length | 531 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640787681 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001324488 |
|---|
| Protein GI | 150400722 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
|---|
| TIGRFAM ID | [TIGR03269] methyl coenzyme M reductase system, component A2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTATTGC TTGAAGTAAA AAATGTTAGT AAAAAATTTG GAGATAGTGA GGTATTGAAA
AATATAAATT TTACATTGGA TGAAGGAGAG GTTCTTGGAA TTCTTGGAAG AAGTGGTGCT
GGAAAATCGG TTTTACTACA TATGCTTAGG GGTATGGAGG GGTATGAACC AACAGAAGGG
CAGATAATTT ATACCGTAGC TCAATGTGAT GGATGTGGTT CAGTAGAAGT TCCTTCGATG
GAAAATCAAA AATGTAGTTG TGGAGGCAAT TATGAGCTGA TTTCTGTTGA TTTCTGGGAC
AAAAATCAGA CAACATTTAA TTTAAAAAGA AAAATTGCCA TAATGCTCCA AAGAACTTTT
GCTTTATATG GTGAGCAATC TGTTATTGAA AATATATTGC AGGCACTATC AGCAGCAGGG
TATGAAGGAA AAGAGGCAAC AAATATAGCT CTAAAATTAA TAAAAATGAT TAAAATGGAG
CATAGAATTA CTCATGTTGC AAGAGATTTA AGTGGGGGAG AAAAACAGAG GGTAGTTCTT
GCACGACAGA TAGCTAAAAA ACCAATCATA TTTTTGGCAG ATGAACCAAC TGGAACACTG
GACCCAAAAA TCGCAAAAAT TGTTCATAAA GCACTAAAAG AGACCGTAGT TAAAAATAAA
ATAGGCATGG TAATAACTTC TCACTGGCAC GAGGTAATAG AAGAATTGGC AAATAAAGCC
ATATGGTTAG AAAAAGGAGA GATAAAAGAA CAGGGAGATA GTAAAGAAAT AGTTGCTAAA
TTTGTAGAAA CCATTACAGA ATTAAAGAAA TTTGACAAGG TTGAAATTAA AGAGGATATG
GCAATATTGG AAAATGTTGA GAAAAAATAT TGTTCGGTTG AAAGGGGAAT TGTAAATGCC
GTTGGTGGAG TATCATTAGA TATTAAAGAA ATGGAAATAT ATGGATTGGT TGGAACCAGT
GGTGCTGGAA AAACTACCTT ATCAAAAATA ATTGCAGGTG TAATTCCTCC ATCGAAAGGA
AAATATATAT TTAGGGTGGG GGATGAATGG GTAGATATGA CACAACCTGG TCCAATGCAT
AGGGGAAGGG CAAAAAGATA CATAGGTATG TTATTCCAAG AATACACATT ATATCCACAT
AGAACAATAT TATACAACCT TACAGAATCC ATTGGCTTGG AGCTCCCTGG AGAATTTGGA
ATGATGAAAG CTAATCAGGT GTTGGTTTCA GTAGGTTTCA CAGAAGAGGA GGCAGAGAAA
CTATTGGATA AATATCCAAA TGAGCTCAGT GTTGGGGAAA AACACAGAGT AGCACTTGCC
CAAGTTCTTA TAAAAGAGCC ACATATGGTA TTATTAGACG AACCAACTGG AACAATGGAT
CCAATTACAA GAAACCAAGT TGCAGAATCG ATTCAAAAAT CAAGGGCAGA ATTAGAGCAA
ACTTATGTTA TAGTATCTCA TGATATGGAT TTTGTGTTAA ATGTATGTGA TAGGGTGGCA
TTAATGAGGG GAGGCAAAAT AATTAAAATA GGAGCTCCCG AAGAAATTGT TCAAATATTG
ACGGAAGAAG AAAAAGAAGA AATGATTGGA CATTAA
|
|---|
| Protein sequence | MVLLEVKNVS KKFGDSEVLK NINFTLDEGE VLGILGRSGA GKSVLLHMLR GMEGYEPTEG
QIIYTVAQCD GCGSVEVPSM ENQKCSCGGN YELISVDFWD KNQTTFNLKR KIAIMLQRTF
ALYGEQSVIE NILQALSAAG YEGKEATNIA LKLIKMIKME HRITHVARDL SGGEKQRVVL
ARQIAKKPII FLADEPTGTL DPKIAKIVHK ALKETVVKNK IGMVITSHWH EVIEELANKA
IWLEKGEIKE QGDSKEIVAK FVETITELKK FDKVEIKEDM AILENVEKKY CSVERGIVNA
VGGVSLDIKE MEIYGLVGTS GAGKTTLSKI IAGVIPPSKG KYIFRVGDEW VDMTQPGPMH
RGRAKRYIGM LFQEYTLYPH RTILYNLTES IGLELPGEFG MMKANQVLVS VGFTEEEAEK
LLDKYPNELS VGEKHRVALA QVLIKEPHMV LLDEPTGTMD PITRNQVAES IQKSRAELEQ
TYVIVSHDMD FVLNVCDRVA LMRGGKIIKI GAPEEIVQIL TEEEKEEMIG H
|
|---|
| |