| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0195 |
|---|
| Symbol | |
|---|
| ID | 5327555 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus aeolicus Nankai-3 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009635 |
|---|
| Strand | + |
|---|
| Start bp | 210984 |
|---|
| End bp | 212048 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640787590 |
|---|
| Product | MscS mechanosensitive ion channel |
|---|
| Protein accession | YP_001324399 |
|---|
| Protein GI | 150400633 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3264] Small-conductance mechanosensitive channel |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0052728 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAA GCAATATTAC ATATTATGGA AATACAACAT ATGATATTAT ATTATTTATT
TTAATTATAT TTTTTGGAAT AATTGCAGGG AGACTATTTA ACACAATTAT AAAAAGAAAA
TTAAAGAAAA TAGTGAGTAA AACCAAAACT AAATTTGACG ATATCATATT TGATGCTATT
GAATTACCTG CTTCAATATT AATATTTGTA TTATTTTTTT ATTTTGCTTT AAATACTATA
CTAATTCCTA AAACAATTGG TATCTTATTA TATGAATTAA TAGATATAAT GGTAATAATA
GGGGCAACCT GGTTTGTGCT TAATTTCACA GATAGTTTCA TACAGCACTA CATTATTCCA
AGGGTAAATA AAACGGAATC TACATTTGAT GACCATATAA TAGTCCCATT ACGAAAACTA
TTAAAATTAA TAATTATATG CTTGGGGTTA TTGATGGCAA TAGATGCCGC AGGATATAAT
ATATCCACAT TACTTGCTGG ACTTGGTATT GGGGGTCTTG CTGTGGCACT TGCAGCCCAG
GATACAGTTA AAAATTTTAT ATCGGGGGTT TTATTAATAA TAGATAAACC ATTTAAATTA
AATCAATGGA TTGAATTTGA CGGGGTTGAA GGAGTTGTAG AGGATATAGG TATCAGAAGC
ACAAAAATAA GAACATTTAA TGATAGTTTA ATAATTGTGC CAAATGCAGT TGTAATAAAT
GCCAACATTG AAAACCATTC GGAGATGAAA AAAAGGAGAG TTAAAACAAT TATTGGATTA
ACCTATGATA CCCCAGTTGA TAAATGTAAA TTGGCAAAAG AAATTATACA TACCATACTA
GAAGACCACA GGACAACGCT CCCACCATAT AGAATTACAT TTAACGAATT CGGAGCTCAT
TCATTAAATT TTAGATTGGA GTATTTTATT AGAAATATGG GTTTTGATTA TTATCTTAAT
GCAGTTGATG ATATAAACAT GAGAATAAAA GAAGAATTTG AAAAAGAAGG CATTGAAATG
GCATTTCCTA CCCAAACAAT ATATTTGAAG AAGGGGGACA ACTAA
|
|---|
| Protein sequence | MDLSNITYYG NTTYDIILFI LIIFFGIIAG RLFNTIIKRK LKKIVSKTKT KFDDIIFDAI
ELPASILIFV LFFYFALNTI LIPKTIGILL YELIDIMVII GATWFVLNFT DSFIQHYIIP
RVNKTESTFD DHIIVPLRKL LKLIIICLGL LMAIDAAGYN ISTLLAGLGI GGLAVALAAQ
DTVKNFISGV LLIIDKPFKL NQWIEFDGVE GVVEDIGIRS TKIRTFNDSL IIVPNAVVIN
ANIENHSEMK KRRVKTIIGL TYDTPVDKCK LAKEIIHTIL EDHRTTLPPY RITFNEFGAH
SLNFRLEYFI RNMGFDYYLN AVDDINMRIK EEFEKEGIEM AFPTQTIYLK KGDN
|
|---|
| |