| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Maeo_0026 |
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| Symbol | |
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| ID | 5327186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus aeolicus Nankai-3 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009635 |
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| Strand | + |
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| Start bp | 27044 |
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| End bp | 29605 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640787421 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001324231 |
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| Protein GI | 150400465 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01057] DNA topoisomerase I, archaeal |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGATT TAATAATCTG CGAAAAACCG AATGTATCAA AAAAAATAGC CGATGCTCTT
GGAAAACCTA AAAAGAAATC AAATGATGGG GTTCCATATT ATGAAATAGA ACGAAATGGA
AAAAAAATAA TTGTAGCATC TGCTGTTGGT CATTTATATA CATTAGAGGA GAAAAAATCC
GACGAAAAAG GAAAAAATAA AGGAAGAAAT AGCTTTGGGA GATATCCTAT TTTTGATATA
AGGTGGGTGC CAGCTTCTAC AATAAAAGGA AAGGAATATG TTCAAAAATA CATAAATACA
TTAAATAAAT TATCTAAGAA ATCAAATGAT TATTATATTG CTTCGGATTG GGATATTGAG
GGGGAATTAA TAGGTTATCA TGCACTACGA TATTGTTGTA ATGAGGATAA CGCAAAAAGA
ATGAGATTTT CATCACTTAC TAAAAAGGAT ATTATTAAAG CATATGAGCA ACCCGATAAT
ATAGATTTTG GGCTTGTTGA TGCAGGGGAT ACAAGGCATA GATTAGATTG GTATTATGGT
ATCAATATGT CTGTGGCACT GATGCAATGT ATAAGGTCAG TCAATAGATG GCATACAATG
AGTACAGGGA GGGTTCAAGG TCCAGCATTA TCTTTTTTAG TGGATAGGGA GCTTGAAATA
AGAAAATTTG TGCCTGTGCC ATACTGGGTA ATAGATGCAA ATTTAAAAGA TGGATTGATA
GCAATACATG AAAAAGATAA ATTTTGGGAC GAAAAGGAAG CTAACACAAT TTACAACAAA
ATAAAAGACG AGAAGGAAGC AATTGTAGCA AATGTTAAAA AAACTAAAAA AACAATTAAA
CCTAATCCGC CATTTGATTT GGGGGCTCTC CAAAGAGAGG CACATAGAAT ATTTAAATTC
TCACCAAAGA AAACTCAGGA AATCGCTCAG AAATTGTATG AAAAGGCAAT TTGTTCATAT
CCAAGAACAA GCTCCCAAAA ACTTCCAAAA GATGATAATT ATATTAATGA CATATTAAAT
AAAGTTGTAA ATCATAATAT ATATGGAAAA TACGCAAAAT CTATAATTGA GGAAGGAAGG
AAACCTATTG AGGGGAAAAA GGACGACCCA GCTCACCCCG CAATTCATTT TGTGGATACT
CCAAAAGAGG AGCTCCCACC AGAGGAACAA AAATTATATG ATTTAATTGT AAGAAGAACT
CTTGCCGTAT TTTGGGATAA TGCTGAAAGA GAATATAGCA ATATATCGTT GGACATAGGA
GGGGAGATTT TTAAACTTAG TGGCTCACGA ACCATTAAAG AAGGTTGGCA TGAAATATAT
TATTTCACTA AATTTGATGA GACGGAGCTC CCTGCCCTAA GAAAAAATAA TAAAATTGTC
GTAGAAAAAA TCAATATTGA GGAAAAGGAG ACCAAACCGC CAAAAAGATA TACAATGTCT
TCAATTATTA AAGAGCTTGA AAATAGGGAG CTTGGAACAA AATCCACCCG AGCTGACATT
GTAGAAAAAT TGGTAAAAAG AGGCTACTTA ATAGAGGATA ATTCTTTAAC TGTGACGGAT
TTAGGTATTG GAGTAATAGA AGTTCTTAAA AAATACTGTC CCGAGATTAT AGACGAGCAA
ATGACAAGAG AGCTTGAAAA GAAATTGGAT AGATTGCAAA AAAGAACCAT AAAAAAAGAA
ACAGTTTTAA AGGATGCCGA AAAGAAATTA ACGGCGATAC TTAATGAAGT TAAGAAAAAG
GAAAAAGAAA TAGGGGCTGA ATTGGTTGAA AAAGTAGATG CCACAAATAA AACACTTCAA
ACCATAGGTA AATGTGAATG TGGAGGGGAT TTGGGAATAA TCAGAATAAA AAATAAAAGA
AGATTTGTAG GTTGCTCTAA CTATCCAGAA TGCACCATTG CATACCCATT ACCTGCCAAG
GGAAGAATTA AAATACCAAA TGAAGTTTGT GAGGTTTGTG GAAAACCTAT GTTATTAATT
GATAATCAAA AACTTTGTGT AAATACAGAT TGTCCTTCAA AAATATCCGA AGAAGATAAA
AAAGAATTGG AAAAATTGGA GAAAAGCGAA AAACCATGCC CAAAATGTGA TGGAACACTT
ACAGTGAAAA AAGGAGTTTA TGGTGTATTT TTAGGTTGCT CTAACTATCC AAAATGTAAA
TACACTGAAA AATTACATAG TAAGAAAGAA GATTCCGAAA TTACTGTTGT TGGTGAATGT
CCAGACTGTG GAGGGGATTT GGTGATTAAA AAAGGTAGAT TTGGAGAATT TATAGCCTGT
TCCAACTATC CAAAATGTAA GCACACTGAA AAGATTAAAA AAGATGGTAA AAGCAATGCC
AAAGCCACCA AAACAGAAAA AACAGAAACT AAAACCACCA AAAAGAAATC CACAAAAGGA
AGCACAACAA AGGAAAAGAA AAAACCAGAT AATTCAAACG AAGTTGGTGA ATGTCCAGAC
TGTGGAGGGG ATTTGGTGAT TAAAAAAGGT AGATTTGGAG AATTTATAGC CTGTTCCAAC
TATCCAAAAT GTAAGCACAC TGAAAAGATT AAAAAAGATT AA
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| Protein sequence | MTDLIICEKP NVSKKIADAL GKPKKKSNDG VPYYEIERNG KKIIVASAVG HLYTLEEKKS
DEKGKNKGRN SFGRYPIFDI RWVPASTIKG KEYVQKYINT LNKLSKKSND YYIASDWDIE
GELIGYHALR YCCNEDNAKR MRFSSLTKKD IIKAYEQPDN IDFGLVDAGD TRHRLDWYYG
INMSVALMQC IRSVNRWHTM STGRVQGPAL SFLVDRELEI RKFVPVPYWV IDANLKDGLI
AIHEKDKFWD EKEANTIYNK IKDEKEAIVA NVKKTKKTIK PNPPFDLGAL QREAHRIFKF
SPKKTQEIAQ KLYEKAICSY PRTSSQKLPK DDNYINDILN KVVNHNIYGK YAKSIIEEGR
KPIEGKKDDP AHPAIHFVDT PKEELPPEEQ KLYDLIVRRT LAVFWDNAER EYSNISLDIG
GEIFKLSGSR TIKEGWHEIY YFTKFDETEL PALRKNNKIV VEKINIEEKE TKPPKRYTMS
SIIKELENRE LGTKSTRADI VEKLVKRGYL IEDNSLTVTD LGIGVIEVLK KYCPEIIDEQ
MTRELEKKLD RLQKRTIKKE TVLKDAEKKL TAILNEVKKK EKEIGAELVE KVDATNKTLQ
TIGKCECGGD LGIIRIKNKR RFVGCSNYPE CTIAYPLPAK GRIKIPNEVC EVCGKPMLLI
DNQKLCVNTD CPSKISEEDK KELEKLEKSE KPCPKCDGTL TVKKGVYGVF LGCSNYPKCK
YTEKLHSKKE DSEITVVGEC PDCGGDLVIK KGRFGEFIAC SNYPKCKHTE KIKKDGKSNA
KATKTEKTET KTTKKKSTKG STTKEKKKPD NSNEVGECPD CGGDLVIKKG RFGEFIACSN
YPKCKHTEKI KKD
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