| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1634 |
|---|
| Symbol | |
|---|
| ID | 5325972 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1652199 |
|---|
| End bp | 1653167 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640787328 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_001324138 |
|---|
| Protein GI | 150400371 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00686439 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGACC TAAAAAATAA ACTGCTCTTA AAACCTCGAA AAGAAGTTTC AAAAGAACCG
CCTGAGCTTA AAAAATGGCT CAACAAGTTT AAAGAAGAAA GAGAATTTGA CGGAATTAAA
ACATCAACAA TTGGAAACGA TATAACCCGA TTGAAAGTAT TTTTAAACTT CGTACTTGAA
CGGCTTGAAA AGTCCCCTAA CGAACTTACA AATGCCGACT TTGTAAAATT TTTTAACTTT
TTGGAACGGG AAAGAAAACT TTCAAGAAAT ACCCAAAATA GATACTACCA ACTTTTAAAG
GTCTTTTACA GGCTCATGCG ACTTGAAAAC TTTAAAGACT TTAAAGAAGA AAGCCAAGAG
CGAAAACGGT TCTCAGGTTT TGAAATAAAG CACTACGATG CGGTTTCGTC AGAACTTTTA
AACGACATAA TAAATATCGT TGTTGAAAGT AAAAGCAGAA CCAAAATCCG GGATGCAACA
ATTATCCGAT TTCTTTGGGA TTCAGGATGT AGAATTTCTG AAGCTCTAAA TTTAACATAC
GGGGATTCAG ACCTTGAAGA AGGAACATTC GTTTTAAGAA ATACTAAAGG GAATGCTGAA
AGAACAGTTG TATGTTCAAG AGATACATTG GATGTAATAA ACTACTACGT CCAGTACAAT
GTCAAAAAAG GATCTAAAGA TAAGCTATTT CAAAATTCTG ATGGAGAACC TATCGGAAGG
GGATGGATTG GGGAAATTTT TAGAAAAGCT GTCGATAGAT TGAAAAAAGA AGGAAGGATT
CCAGCAAACA AAAAAGTCGT TGTTCATTCA TTGAGACACG GCAGAGCTGT TGATTTACTT
GAAAAGGGGC AACCAATAGA TATTGTAAAA GAATATTTAG GTCATAAATC ACTTGATACA
ACTCTTTTCT ATTCTCATTC AAAGGAAAGA AAGGAAAAAA TGATTAAAAA TATTCAAAAA
ATATTATAA
|
|---|
| Protein sequence | MNDLKNKLLL KPRKEVSKEP PELKKWLNKF KEEREFDGIK TSTIGNDITR LKVFLNFVLE
RLEKSPNELT NADFVKFFNF LERERKLSRN TQNRYYQLLK VFYRLMRLEN FKDFKEESQE
RKRFSGFEIK HYDAVSSELL NDIINIVVES KSRTKIRDAT IIRFLWDSGC RISEALNLTY
GDSDLEEGTF VLRNTKGNAE RTVVCSRDTL DVINYYVQYN VKKGSKDKLF QNSDGEPIGR
GWIGEIFRKA VDRLKKEGRI PANKKVVVHS LRHGRAVDLL EKGQPIDIVK EYLGHKSLDT
TLFYSHSKER KEKMIKNIQK IL
|
|---|
| |