Gene Mevan_1622 details

Gene Information

• Locus tag: Mevan_1622
• ID: 5326200
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 1638495
• End bp: 1639124
• Gene Length: 630 bp
• Protein Length: 209 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 640787315
• Product: ribonuclease H
• Protein accession: YP_001324126
• Protein GI: 150400359
• COG category: [R] General function prediction only
• COG ID: [COG3341] Predicted double-stranded RNA/RNA-DNA hybrid binding protein

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000792323
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAAAA TTTATGCAGT AAGGAACGGT AGAAAAACTG GAATTTTTGA TACATTTGAA 
GAATGTGAAA AACAGGTGAA AGGTTTTTCA GGTGCAGAAT TTAAGAGTTT TAATTTAAAA 
TCTGATGCAG AGAAGTATTT GGATATAAAT AATCTTTCAA GTTCAACTAA ACTAGAAAAT 
CTTAATCAAA ACAGGATTTT GTATACAAAT GAGGATTTAG ACACCATGCA CGCCTTTGTT 
GACGGGAGTT TTAATTTAAA GACTGGATTT TATGGCGCAG GCGTTTATAT AATACATAAT 
GATTTAAAAA CTGAAATTAA ACAAAAAGGG AATAATCCTG CTTTTTCAAA AATGAGAAAT 
GTAGCAGGCG AAATTTTGGC AGCCGAGTTA GCAATTAAAC ATGCTTCATC TAAAAATGTG 
AAAAATTTGA TAATATATTA TGACTATTTT GGGATTGAAA AATGGTGCAC TGGAGAATGG 
AAGACAAAAA TGTTAGGTAC TGCCAAATAC CGTGAAATTT ACTTAGAACA TAGTGTAAAA 
ATAAACATTA AATTTATAAA AATAAAAGCA CATTCTAAAG AAAAGAATAA TGAAATAGCC 
GATAGACTTG CAAAAGAATC GCTAATTTAA 

 

Protein sequence

MAKIYAVRNG RKTGIFDTFE ECEKQVKGFS GAEFKSFNLK SDAEKYLDIN NLSSSTKLEN 
LNQNRILYTN EDLDTMHAFV DGSFNLKTGF YGAGVYIIHN DLKTEIKQKG NNPAFSKMRN 
VAGEILAAEL AIKHASSKNV KNLIIYYDYF GIEKWCTGEW KTKMLGTAKY REIYLEHSVK 
INIKFIKIKA HSKEKNNEIA DRLAKESLI