Gene Mevan_1620 details

Gene Information

• Locus tag: Mevan_1620
• ID: 5324927
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 1636974
• End bp: 1637564
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640787313
• Product: TetR family transcriptional regulator
• Protein accession: YP_001324124
• Protein GI: 150400357
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.0021024
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAACTC GTGAAATGAT TTTAGAAAAA TCAAGGGAGA TTTTTTTTAA AAAGGGGTAT 
TTTGAAACGT CTCTTTTAGA AATTGCAAAT GAATGCAAAA TTTCAAAGGG CGGGCTTTAC 
CATCATTTTG AACGAAAAGA GGATTTGTTT ATAGAAACAA TGATTTTAGT CCTGCGTGAA 
AATGAAAGAA TTGTAATGTC TTGCATTGAA AAAGATGGGC CGTTTAAAGA GGCAATAAAA 
GAATTTGCAG AAAAAATGTT ATTTCTTCGA AATAGATATT TTGAAGAAGG TGTTGAAAAA 
CATTCTAATT CATTATATTT GGGCCCCCTT TCAAATGCCA TAAAAAGTTT CCCACAAATT 
GGGGAAGAAA ACAGAAAATT GTATGGGAAT ATCTTTGAAA AAGTAGTAAT CCGGATTAAA 
AAAGCACAAA AATTAGGGGA AATTCGAAAA GAAATAAATC CCGAAATTCT AGCAATTCAA 
TTTTGTGCAA TATTTGAGGG CCTTCCAATA GCTTCATATT ATGCAGGTAA AGATTTTGAT 
GAAGTATCTA AGTCACTTTT TAAGTCGTTA TGGGATCTTA TAAAAATTTA A 

 

Protein sequence

MVTREMILEK SREIFFKKGY FETSLLEIAN ECKISKGGLY HHFERKEDLF IETMILVLRE 
NERIVMSCIE KDGPFKEAIK EFAEKMLFLR NRYFEEGVEK HSNSLYLGPL SNAIKSFPQI 
GEENRKLYGN IFEKVVIRIK KAQKLGEIRK EINPEILAIQ FCAIFEGLPI ASYYAGKDFD 
EVSKSLFKSL WDLIKI