Gene Mevan_1600 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_1600 
SymboluvrC 
ID5324663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp1616558 
End bp1618141 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content28% 
IMG OID640787293 
Productexcinuclease ABC subunit C 
Protein accessionYP_001324104 
Protein GI150400337 
COG category[L] Replication, recombination and repair 
COG ID[COG0322] Nuclease subunit of the excinuclease complex 
TIGRFAM ID[TIGR00194] excinuclease ABC, C subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0084899 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATC TATCAGTTAT TCCAAAAGAA CCAGGATGCT ACATATATAG GGATATTGAA 
AAAAATATAA TATATGTTGG AAAAGCAAAA AATCTAAAAA AGCGAATCAG TAGTTATTTT
AGCAAAAAAA ATCACGACAC AAAAACTCAA AACTTGGTAA AATCTATTTT TGACATAGAA
TTTATTGTTA CAAATAACGA AATTGAAGCA TTGCTTTTAG AAAGCATTTT GATTAAAAAA
CACTCTCCCA AATATAATAT AGATTTAAAG GACTCAAAAA ATTATGCTTA TATTTACATA
AGCGAAGAGA ATTTTCCAAG AATTGGGATA TCAAGAAATA AATCAGAAAA AGGAAAGTTT
TATGGGCCAT TTATTTCTGC AAAGGAAAGA GATTATGTTC TTGATATTTT AAAAAAAACT
TTTAAAATAA GGTCATGCAA AAATATGCAG AAACGACCAT GTCTAAGGCA CCATATAAAA
AATTGTACTG CACCGTGTAC GGGAAATATT GCGTCTAAAA AATACTTGGA TCAGATAAAA
AAGGCAGAAT ATATATTAAA AGGAAATATA GAATCTTTAA TTTCAAAATT AAAAGATGAA
ATGATTATTA AATCAAAAAA TCTCCAGTTT GAGGAAGCAA TATTAATACG GGAAGAAATA
TCTGCTATTG AAAATCTGAA AACTAAGCAG AACATTAACA GGCAGAAAAA TTATGATGAA
GATATTATTG CATATATTGA AAAAGATGGG AATATCCATA TTATTGTATT TAACGTGTTA
AAAGGAACAT TATATGATAA AAAATATTTT AAATTTGAAT ACGTAGAAAA TTTCTTTGAA
GAATTTTTAA TACAATATTA TTCCGAAAAC CGCCCGCCTT CTGAAATAAT AATTTCAGGT
TTTCCAAAAG ATTTTGAAGA CTTTTCAAAG GAATACAATC CAAATGCACT TTTAGAATTT
TTATCAAAAA AAAGGGAATC AAAAGTTTCA TTTAAAGTAC CTAAAAAGGG AGAAAAAAAA
GAATTGTTAA ATCTTGCAAT GAAAAATCTT GAAATCTTGG TTTTAGGAAA TGATTTAAAA
GTTGAAGCCT TAAAAAACAA ATTAATGCTA GAAAATCCTC CAAAAGTTAT TGAATGTTTT
GATATATCCC ATCTTTCCGG AAATTTTACT GTTGCATCGA TGGTGCAGTT TAGGGATGGA
AAAGCGGACA AAAAAAATTA CCGGAGATAT AAAATTAAAA CAGTTACTGG AATTGATGAC
TTTAAATCAA TTTCTGAAGT TGTTTTTAGG CGCTACAGTA AATTATTAAA AGAAAATTCA
AAAATGCCTG ATTTAATAAT CATTGATGGG GGAAAGGGCC AATTATCCTC TGCATTTTAT
GAATTAAAAA AGTTAAACTT AAAAATACCC GTAGTATCCA TTGCAAAGAG GGAAGAAGAA
ATTTACGCTC CAGGAACTGA AAACGCCCTT CCAATAACCA AAAATGAAAA AGCGTCATTA
TTCATTCAGG AGATCCGTGA TGAGGCACAC CGGTTTGCAA TAACATATAA CAAACTTTTA
AGGAAAAAGG ATTTGATAAA ATGA
 
Protein sequence
MINLSVIPKE PGCYIYRDIE KNIIYVGKAK NLKKRISSYF SKKNHDTKTQ NLVKSIFDIE 
FIVTNNEIEA LLLESILIKK HSPKYNIDLK DSKNYAYIYI SEENFPRIGI SRNKSEKGKF
YGPFISAKER DYVLDILKKT FKIRSCKNMQ KRPCLRHHIK NCTAPCTGNI ASKKYLDQIK
KAEYILKGNI ESLISKLKDE MIIKSKNLQF EEAILIREEI SAIENLKTKQ NINRQKNYDE
DIIAYIEKDG NIHIIVFNVL KGTLYDKKYF KFEYVENFFE EFLIQYYSEN RPPSEIIISG
FPKDFEDFSK EYNPNALLEF LSKKRESKVS FKVPKKGEKK ELLNLAMKNL EILVLGNDLK
VEALKNKLML ENPPKVIECF DISHLSGNFT VASMVQFRDG KADKKNYRRY KIKTVTGIDD
FKSISEVVFR RYSKLLKENS KMPDLIIIDG GKGQLSSAFY ELKKLNLKIP VVSIAKREEE
IYAPGTENAL PITKNEKASL FIQEIRDEAH RFAITYNKLL RKKDLIK