| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1548 |
|---|
| Symbol | |
|---|
| ID | 5326096 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 1561676 |
|---|
| End bp | 1562620 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640787240 |
|---|
| Product | malate dehydrogenase |
|---|
| Protein accession | YP_001324052 |
|---|
| Protein GI | 150400285 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0039] Malate/lactate dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATATAG CAATAATTGG AGCTTCCGGA AAAATTGGAA GTGCATTATC TTTATTGTTA
TCTAAAGAAC CATATATAAA ACACATTAAG TTAATAGGGC GAGATAATTC AATAAATAAA
TTAAAAGGAC TTAAAATGGA TTTATATGAT TCAATGGCTG CATCAGGCCA AGATACCGAT
ATTCAAGTTT TTTCAGATAG CGAAATGTCA TGTGTTAATG GTTCGGATAT TACAGTAATT
ACTTCAGGAA TTTCAAGAAA TGGCGAGATT TCAAGGCTTG ACCTTGCAAA AGAGAATGCT
AAGATAGTTA AAAAATACGT GAAAGATATT TCAAAGTGCT GTGATACTAA ATTATTCATG
ATAACAAACC CTGTTGATGT CATGACTTAT AAGGCATATA TTGAGAGCGG ATACGAAAAA
AATCAGGTAT TTGGGCTTGG TACGCACCTT GATTCCATGA GATTTAAAGT TGCAGTTGCA
AAATATTTCA AAGTCCATAT TGATGATGTA AGGACGAGAA TTGTTGGTGA ACACGGCGAC
AGCATGGTTC CACTTATGAG TGCAACCTCA ATTGGAGGAA TTCCTGCTAG AAGACTTCCA
GGATATGAAA ATTTCCCATA CTATGAAACG CTTGAAAGAA TCAGAGGTTA TGGAAAAGAA
ATAATCGATT TAAAAAATGG TTCTGAATAT GGGCCTGCAT CCGCAATTTT AAATATTATT
CGATGTATAT CCCAAGACGA AAAAAGGCTT TTAACTCTTT CTGCATACGT TGAAGATGAA
ATAGAAGGAA TTTCTGGCGG TTCATGCATT GGAGTTCCTG TTAAAGTCGG TAAAAATGGT
ATTGAAGAAG TAATTCACAT GAAAATGAAG CAAGGGGAAT TTGAACTATT TAGGGAGTCC
TTTGAGATAG TTAAAAAATA TTGTAAGGAG ATAGAAACGA TTTAA
|
|---|
| Protein sequence | MDIAIIGASG KIGSALSLLL SKEPYIKHIK LIGRDNSINK LKGLKMDLYD SMAASGQDTD
IQVFSDSEMS CVNGSDITVI TSGISRNGEI SRLDLAKENA KIVKKYVKDI SKCCDTKLFM
ITNPVDVMTY KAYIESGYEK NQVFGLGTHL DSMRFKVAVA KYFKVHIDDV RTRIVGEHGD
SMVPLMSATS IGGIPARRLP GYENFPYYET LERIRGYGKE IIDLKNGSEY GPASAILNII
RCISQDEKRL LTLSAYVEDE IEGISGGSCI GVPVKVGKNG IEEVIHMKMK QGEFELFRES
FEIVKKYCKE IETI
|
|---|
| |