Gene Mevan_1490 details

Gene Information

• Locus tag: Mevan_1490
• Symbol: radB
• ID: 5325246
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus vannielii SB
• Kingdom: Archaea
• Replicon accession: NC_009634
• Strand: +
• Start bp: 1512940
• End bp: 1513581
• Gene Length: 642 bp
• Protein Length: 213 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 640787184
• Product: DNA repair and recombination protein RadB
• Protein accession: YP_001323996
• Protein GI: 150400229
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0468] RecA/RadA recombinase
• TIGRFAM ID: [TIGR02237] DNA repair and recombination protein RadB

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 0.695224
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTTGAAG AAATTTTAAA TGGTAACATC GAAAAAAAGA CCATAACTCA AATTTACGGG 
CCCCCGGGCG TTGGAAAAAC TAATATATGT ATAATTTCAA TGATAAAAAC AATAGAGCAG 
GGTAAAAAGG TAGTTTATAT TGATACTGAA GGAGGTTTAT CTATTGAACG GGTAAAACAA 
ATATTTAAAG AAGATTTTAA CACACTACTT AAAAATATCC TACTCTATGA GCCTTCAACA 
TTTGAAGAAC AGACAAAAGT GCTTGAAAAG ATACTGCTTC TTGAAAATAT CGGACTTATA 
ATTATTGACG GCATTGTTTC ACTTTACAGG CTAGAACTTT GTGACGATAT AGTCGAAAAC 
ACGAAATTAA ATCGTATTCT TGGAAAACAG ATATCCACGC TTTTAAAAAT TTCAAGAAAA 
AAAGATTCAG GAATATTAAT TACAAATCAA GTAAAAGATT CATTATCTGG ATTTGAACCT 
GCGGGAGGAA GACTTTTAGA ATATTGGAGT AAATCAATTA TTCGTGCTGA AAAAAAGGAC 
ACGTATAGAA AACTCACGCT TGAAAAACAC CGATGTTTTA AAGAAGGAGA AATTTTGAAA 
TTCATAATTA TTGAAAATGG AATTGAAATA TTAAAAAATT AG 

 

Protein sequence

MLEEILNGNI EKKTITQIYG PPGVGKTNIC IISMIKTIEQ GKKVVYIDTE GGLSIERVKQ 
IFKEDFNTLL KNILLYEPST FEEQTKVLEK ILLLENIGLI IIDGIVSLYR LELCDDIVEN 
TKLNRILGKQ ISTLLKISRK KDSGILITNQ VKDSLSGFEP AGGRLLEYWS KSIIRAEKKD 
TYRKLTLEKH RCFKEGEILK FIIIENGIEI LKN