| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1468 |
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| Symbol | |
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| ID | 5324778 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus vannielii SB |
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| Kingdom | Archaea |
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| Replicon accession | NC_009634 |
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| Strand | + |
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| Start bp | 1491438 |
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| End bp | 1492910 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640787162 |
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| Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
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| Protein accession | YP_001323974 |
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| Protein GI | 150400207 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.665023 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTTCA TTGCCTTTGC ACCCTTTGGA GCATTTGCAT TTGAGGAAAC TTCGAAAAAC
GGCGAATACT CAATAGAAGA TATTAAATAC TATAAAATAT TTGATAATGT CGAAATTCCA
AAAATTATGT ATGATTTTAG GCAGGCTAAT TTCGAAATTA TTGGTGAAAT AAAAAAAGAA
TGGGAAATTG AAGAAGTAGA TGTGAATGTT GAATACACTA GTTCAAAAAT AAATCCTACG
GGGGAGTTTA TTAGGAACAA CCTATTTGAA ATTGGGAAAC ATTACGGGAT TTTTGAAGAT
AATGAAGACT TTTTAATAAA AATGAATGAA TGGGGAACCC AATTTACAAA GTTAATGATG
AAAAAATCAT CGGAACAAAA AGATAAATTG ATAGTACAGA CAGTAAATGC TCTTGATAAC
CTTGATGAAA CATTAAACTT GTTTTCTGAA AGACTTAGGG AATGGTATTC ACTGTATTTT
CCAGAAATGG ATAGTTTAAT TAAAAAACAC GATATTTACG TTAAATTAGT TTCTGAATAT
GGTGACAAGG AAGAATACAC GAGAACAAGT CTTAAAAAAA CAATGCCTTC AAATATTGCA
AGAACGATTT CTCTTGCGGC AAAAGAGTCA ATGGGGGCAG ACGTATCAGA ATACGACCTT
GAAATAATGA AAAACCTTGC AAATGAAATA AATGGAATGT ATGAATACCG TGAAAAGTTA
CAAGAGTACT TAGAAGCTTC AATGAAGGAA ATTGCGCCGA ATTTAACTAA ACTTGCAGGT
GCTTCAATTG GTGCAAGATT AATAAGCCTT GCTGGGGGAA TGGAACGGCT TATAAAACTT
CCAGCGTCAA CTATTCAGGT AATTGGTGCA GAAAAAGCAT TATTTGCACA CTTAAGGGAA
AGAGCAGCAC CTCCAAAACA TGGTATAATA TTCCAACACC CCCTTATTCA GGGAAATCCG
TGGTGGATTC ATGGAAAAGT TGCAAGGGCA ATTTCATGTA AAATTTCTAT TGCAATAAGG
GCGGACGTTT TTGGAAATGA CATTTCAGAA ATGCTTTTTG AAGATATGAA TAAAAAAGTT
GAAATGATAA AGGAAAAATT CCCAGAACCG ACCAAAAAGA GAAGACCAAG GCCTGACACA
AGAGACTTTA AAGGTAAAGG CGGGCCTAAA AGAGATGATG GAAGGCCAAG AGATGGAAAG
CCATTTAATA AGCCAAAAAG TGGTGAAAAA GATGGAAAAC CACGAGATGG AAAACCACGG
GGAAATAAGC CGTTTGGTGA AAAGCCAAGG GGAGATCGGA AAAAAGATGA TGGAAGGCCA
AGAGATGGAA AGCCATTTAA TAAGCCAAAA AGTGGTGAAA AAGATGGAAA TAGGCCAAAA
CCACAAAATG AAAGAACAGG CGAAAAAAGA GGCGGACCGC CAAAACCTAA AATGGAAAGA
AAAGTAATTG GAAAAACTTC TTCACAAAAT TAA
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| Protein sequence | MLFIAFAPFG AFAFEETSKN GEYSIEDIKY YKIFDNVEIP KIMYDFRQAN FEIIGEIKKE
WEIEEVDVNV EYTSSKINPT GEFIRNNLFE IGKHYGIFED NEDFLIKMNE WGTQFTKLMM
KKSSEQKDKL IVQTVNALDN LDETLNLFSE RLREWYSLYF PEMDSLIKKH DIYVKLVSEY
GDKEEYTRTS LKKTMPSNIA RTISLAAKES MGADVSEYDL EIMKNLANEI NGMYEYREKL
QEYLEASMKE IAPNLTKLAG ASIGARLISL AGGMERLIKL PASTIQVIGA EKALFAHLRE
RAAPPKHGII FQHPLIQGNP WWIHGKVARA ISCKISIAIR ADVFGNDISE MLFEDMNKKV
EMIKEKFPEP TKKRRPRPDT RDFKGKGGPK RDDGRPRDGK PFNKPKSGEK DGKPRDGKPR
GNKPFGEKPR GDRKKDDGRP RDGKPFNKPK SGEKDGNRPK PQNERTGEKR GGPPKPKMER
KVIGKTSSQN
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