| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1456 |
|---|
| Symbol | valS |
|---|
| ID | 5324825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | - |
|---|
| Start bp | 1478140 |
|---|
| End bp | 1480800 |
|---|
| Gene Length | 2661 bp |
|---|
| Protein Length | 886 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640787150 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_001323962 |
|---|
| Protein GI | 150400195 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.439058 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATAA AAGAGGAATA TTCGATAGAA CTTGAATCTA AAGTTCAAAA AAAATGGGAA
AATGAAAAAA TATTCAAATT TTTAGAAGAC GAAAAAAGGC CACCATATAT TATAGATACG
CCTCCACCAT ATCCTACTGG AAAAATGCAC CTTGGGCATG GATTAAACTG GACATATATG
GATATTATTG CAAGATTTAA AAGAATGAAT GGGTATGATG TGTTATTTCC TCAAGGATGG
GATTGCCACG GCCTTCCAAC TGAAGTTAAG GTTGAAGAGG TAAATAATAT CACAAAATCC
GATATAAATA GGCATGAATT TAGAAAACTC TGCGTTGAAT TAACTGAAGA AAACGTGGAA
AAAATGAGGA ATCAAGTAAA ATCCCTTGGA ATTTCAATTG ACTGGGACCA AGAATACATT
ACAATGATGC CAGAATATGT TAAAAAATCA CAAACTGCAT TTTTGCGAAT GTATAAAAAG
GGATTAATTT ATAGGGGGAA ACATCCTGTA AACTGGTGTC CTAGGTGTGA AACTGCAATT
GCATTTGCAG AAGTAGAGTA CCAAGAGCGA AAATCTAAAT TAAATTATAT AAAATTCCCT
TACGCTGAAA ACAGTGACAA ATATCTTGAA ATTGCAACGT CAAGGCCTGA ATTAATGGCT
GCATGTGTTG GGATAGTGGT ACATCCTGAA GACGAACGAT ATAGTGACGT TATTGGAAAG
GCCGTTAAAG TTCCATTATT TAATCATGAG GTTAAAGTAT TCCCTGATTT TGACGTTGAA
AAAGAATTTG GTACCGGAGT AGTAATGGTA TGTACATTTG GGGATAAAAC AGATGTTATA
TGGGTAAACA GGCACGATTT AGAAGTTAAA AAAGCAATTG ATGAAAAAGG GCTCCTTACA
ACTATTTGCG GTAAATATAG CGGTAAAAAG TCTGATGATG CTAGAAATGA AATTATTTCA
GATTTAATTA TTGAAAATTA CATGATAAAA CAAGACCCGC TTGAACAAAA CGTTGGCTCA
TGCTGGAGAT GTAAAACGCC AATAGAAATA ATTGTGGGGG ACCAGTGGTT TGTAAACGTT
AGAAAATTAT TAAATGACGT TGAAAAAGCA TCTCATGAAA TAAATTGGGT TCCGGAACAT
ATGAAATCAA GGCTTTTAAA GTGGATTGAA GATATGGGCT GGGACTGGTG TATTTCAAGG
CAAAGGATAT TTGCAACACC TATTCCAGTA TGGCATTGTA AAATATGTGG AAATATTATC
GTTGCAAAAG AAGAAGACTT ACCTATCGAC CCTACAAAGG AAAGTCCATA TACATGTGCG
TGTGGAAATT TAAATCTCAC TCCTGAAACT GACGTTTTGG ATACTTGGAT GGACTCCTCA
ATTACTCCAA TGGTTGTTGC AGGATGGCTA AAAGACGAAA AATTCTTTGA AAAACACTAT
CCCGTACAAT TAAGGCCTCA AGGGCATGAC ATTATTAGGA CGTGGGCATT TTACACGATT
ATCAGGTCTT TAGCACTTAC TTCTGAAAAA CCATGGAATG AAATCGTTGT TAACGGAATG
GTATTTGGTG AAGATGGATT TAAAATGAGT AAAAGCCGTG GAAACGTTGT AGAACCGGGA
GAAATTACAA AAACTTATGG CGCTGATGCA TTGAGGCTTT GGGCTTCAAA CAGTACGATT
GGAAAAGACG TTCCATTTGC ATGGAAAGAA GTAGAATATG GAAGCAGATT TTTAAGAAAA
ATATGGAATG CATGCAAATT TGCTAAAATG AACATTCCCG ATGAAGTAAT TTCAAATTTA
AAATCTATTG AAAACTTTGA AATTGAAAAT CCAATTGATT TATGGATATT AAGTAAATTA
AACGATTTAA TTAAAAGAGT TTCAACGGAT TTAGAAAATT ACAGGATAAA TACCGTTGTA
GAAATTCAAA AATTCTTATG GCATGAATTC TGCGATAACT ACATTGAAAT GGTAAAACAC
AGACTTTATT CAAAAGAAAC TTCAGAATCT GCAAAAAAAG ACAAGCTAAT GGCCCAATAT
TCACTTTATA AGGTAATAAC TGAAACTTTA AAACTAATAG CCCCATTTAC GCCTCATTTT
GCAGAAATTG TCGGGGAAAT TTATGAAGTA GATGACTTAA ATACCTCATG GCCTACAATA
AATGAAAGCT TTATAAATTT GGAAAATGAA TTTATTGGAG AAGTTGCTAA AAATACGGTT
GCTTCAATCA GGAGATATAA ATCAAATAAA GGAATGCCAC TTAACGCAGA AATAAATAAT
GTAAAAATGT ATGTAGGTAG CGAAAAAGAT TTTAATGCAC TTTTGAATGT TTTAAACGAT
GTAAAAGGCT CAATGAAAAT CAAGGAATTT GAAGTAATAA TTGGAAAGCC TTCACTTGAA
CAAAAAATTG CAGAAGTGGT TCCAAACAAG TCCAGAATTG GGCCAGAATT TAAACAAAAC
GCTGGAAAGG TAACTGCATT TATTAAAGAT GCCGATTCTG AAATGATTGA AAAAATACTC
GATACGGGAA TTGAAACTGA ATTTGGAAGA TTAAATAAGG AACATATAAA AGAAGTAAAA
AGAGCCGTAT TTAGTAATGG AGAAATCGTT GAAACAATAG ATATCGATAG TTTAATGGAT
ACTATTGCAA TAATCCAGTA A
|
|---|
| Protein sequence | MEIKEEYSIE LESKVQKKWE NEKIFKFLED EKRPPYIIDT PPPYPTGKMH LGHGLNWTYM
DIIARFKRMN GYDVLFPQGW DCHGLPTEVK VEEVNNITKS DINRHEFRKL CVELTEENVE
KMRNQVKSLG ISIDWDQEYI TMMPEYVKKS QTAFLRMYKK GLIYRGKHPV NWCPRCETAI
AFAEVEYQER KSKLNYIKFP YAENSDKYLE IATSRPELMA ACVGIVVHPE DERYSDVIGK
AVKVPLFNHE VKVFPDFDVE KEFGTGVVMV CTFGDKTDVI WVNRHDLEVK KAIDEKGLLT
TICGKYSGKK SDDARNEIIS DLIIENYMIK QDPLEQNVGS CWRCKTPIEI IVGDQWFVNV
RKLLNDVEKA SHEINWVPEH MKSRLLKWIE DMGWDWCISR QRIFATPIPV WHCKICGNII
VAKEEDLPID PTKESPYTCA CGNLNLTPET DVLDTWMDSS ITPMVVAGWL KDEKFFEKHY
PVQLRPQGHD IIRTWAFYTI IRSLALTSEK PWNEIVVNGM VFGEDGFKMS KSRGNVVEPG
EITKTYGADA LRLWASNSTI GKDVPFAWKE VEYGSRFLRK IWNACKFAKM NIPDEVISNL
KSIENFEIEN PIDLWILSKL NDLIKRVSTD LENYRINTVV EIQKFLWHEF CDNYIEMVKH
RLYSKETSES AKKDKLMAQY SLYKVITETL KLIAPFTPHF AEIVGEIYEV DDLNTSWPTI
NESFINLENE FIGEVAKNTV ASIRRYKSNK GMPLNAEINN VKMYVGSEKD FNALLNVLND
VKGSMKIKEF EVIIGKPSLE QKIAEVVPNK SRIGPEFKQN AGKVTAFIKD ADSEMIEKIL
DTGIETEFGR LNKEHIKEVK RAVFSNGEIV ETIDIDSLMD TIAIIQ
|
|---|
| |