| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mevan_1369 |
|---|
| Symbol | |
|---|
| ID | 5325120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus vannielii SB |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009634 |
|---|
| Strand | + |
|---|
| Start bp | 1398218 |
|---|
| End bp | 1399990 |
|---|
| Gene Length | 1773 bp |
|---|
| Protein Length | 590 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640787064 |
|---|
| Product | putative ATPase RIL |
|---|
| Protein accession | YP_001323878 |
|---|
| Protein GI | 150400111 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1245] Predicted ATPase, RNase L inhibitor (RLI) homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTAGAC TAGGAATTTT AGACCATGAT AGGTGTCAAC CAAGACGGTG CTCAATGGAA
TGTTTAAAGT ACTGTCCCGG AGTTAGAATG GAAGAAGAAA CTATTGTAAT TGATGAAGAT
AGTGGAAAAC CGATAATTTC AGAAGAATTA TGCAGTGGAT GCGGGATATG TACAAAAAGA
TGTCCCTTTC AGGCAATAAA AATTATCGGG CTTCCAAAGG AATTAAGTGA TGAAAAAATA
GTTCATTCCT ATGGGAAAAA TCGGTTTAGA TTATATGGCC TTATAACTCC AAGAGATGGA
GTAACTGGTC TTTTAGGGCC AAATGGGGTT GGTAAATCAA CAATTATAAA GATATTAAGT
GGAGAGTTAA TTCCTAACTT GAACAATCTT TCAAAAGCCC CTGATTTTTC AAAAGTGCTT
GATTATTTTT CCGGAACTGA ACTTCAAAAT TATTTTGAAA AATTAAGGCA AAAAGGAATA
AAACCAATAC ATAAGCCACA GTATATCGAT ATTTTACCAA AAGTCGTTAA AGGGAATGTT
AGTGAACTTT TAAAACGGGT TGATGAAACA GGAAACTTTG AAAAAATTGT AAAAGCCCTT
GAAATTGAAA ACGTTTTGGA TAGAAGTTTT GACCAGCTTT CAGGAGGGGA ATTACAAAGA
GTTGCAATTG CTGCTGCTGC TTTAAGAGAA GGGGACATTT ATTACTTTGA TGAACCGACA
TCATGGCTCG ATGTAAAACA GAGGTTTAGT GCTGCAAAAG TAATCCGTGA AATTGCTGAA
AAAAAGAAAG TTGTTTTAGT AGAACACGAT TTAATTGTTT TAGATTATTT ATCTGACTAT
ATCCATATAT TATATGGTGT TCCGGCAGCT TACGGGGTTT CAACTCATCC AAGGGGGACA
AGAGTTGGGA TAAACACTTA CTTGGATGGA TTTTTAAAAG AAGAAAATAT ACGAGTTAGA
AAAACTCCTA TTATATTTGA AAATAGGCCT CCACAAGATA ATTCAAATAG GCCGATACTT
TTAGACTATA CGGATATTAA AAAAACACAA GGAAACTTTA GTTTAAGTGT TTCAGGCGGC
CAAATTTACC AAGGGGAAGT TGTTGGAATT TTAGGGCCAA ATGGTATTGG AAAAACTACT
TTTGTAAAAA CACTTTCAGG AATAACCAAT CCTGACTTTG GGGAAATAGT TGGAGATATT
AAAGTAGCGT ATAAACCTCA ATATATTGGA ACGGATTATT TAGGAACTGT TGAAGAATTA
TTATCTGAAA TTACAAATAT AAATTCTTCA TTTTATAAAT CCGAAATTAT AAAACCGCTT
TCACTAGAAA ATCTGCTTGA ATCAGAGGTA AAAGATTTGT CAGGAGGGGA ATTACAAAGA
GTTGCAATTG CAACGTGCTT AAGTCATGAT GCTGATTTAT ACTTAATTGA TGAGCCATCG
GCATTTTTAG ATGTTGAACA GCGTTTAACA ACATCAAGAG TAATTAGAAG AATGGCAGAT
GAAAAAGATG CAGCAATGTT TGTAGTTGAC CACGATATAT TATTCCAAGA CTATATTTCT
GATAGGTTTA TAGTATTTAG TGGTGTTTCT GGGATAAATG GAACAGGTTC AGCACCTTTG
AAAAAACGTG AAGGTGCAAA TAAATTTTTA AAAGAAATGA ATATTACATT TAGACGAGAT
TTAGATACTA AAAGGCCGAG AATTAATAAG GAAGGAAGTC AAAGAGATAC ATATCAAAGA
GAAATTGGCG AATACTATTA TATTGATGAA TAA
|
|---|
| Protein sequence | MSRLGILDHD RCQPRRCSME CLKYCPGVRM EEETIVIDED SGKPIISEEL CSGCGICTKR
CPFQAIKIIG LPKELSDEKI VHSYGKNRFR LYGLITPRDG VTGLLGPNGV GKSTIIKILS
GELIPNLNNL SKAPDFSKVL DYFSGTELQN YFEKLRQKGI KPIHKPQYID ILPKVVKGNV
SELLKRVDET GNFEKIVKAL EIENVLDRSF DQLSGGELQR VAIAAAALRE GDIYYFDEPT
SWLDVKQRFS AAKVIREIAE KKKVVLVEHD LIVLDYLSDY IHILYGVPAA YGVSTHPRGT
RVGINTYLDG FLKEENIRVR KTPIIFENRP PQDNSNRPIL LDYTDIKKTQ GNFSLSVSGG
QIYQGEVVGI LGPNGIGKTT FVKTLSGITN PDFGEIVGDI KVAYKPQYIG TDYLGTVEEL
LSEITNINSS FYKSEIIKPL SLENLLESEV KDLSGGELQR VAIATCLSHD ADLYLIDEPS
AFLDVEQRLT TSRVIRRMAD EKDAAMFVVD HDILFQDYIS DRFIVFSGVS GINGTGSAPL
KKREGANKFL KEMNITFRRD LDTKRPRINK EGSQRDTYQR EIGEYYYIDE
|
|---|
| |