Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mevan_1338 |
Symbol | |
ID | 5325128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus vannielii SB |
Kingdom | Archaea |
Replicon accession | NC_009634 |
Strand | + |
Start bp | 1365285 |
End bp | 1366802 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640787030 |
Product | thymidine phosphorylase |
Protein accession | YP_001323847 |
Protein GI | 150400080 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0213] Thymidine phosphorylase |
TIGRFAM ID | [TIGR02645] putative thymidine phosphorylase [TIGR03327] AMP phosphorylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.620213 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGTTTT TGAATGCAAA GTTTATAGAT CTCGATTTAG GTGCAAATGC GGTTATCGTA AATGAAGAGG ATTTGAAGGG AACCTCCTAC TACCCTCAAG ACCGGGTTTT GATAGAATCA CACAGCGGTT CTGTTTTAGG AATACTTTAT TCAACTAAAA CTATGGTTCA AAAAGGTGAA GTTGGAATAC CTGTGCGTAA AATGAAAGGT ATTTCTTTAA AAGAGGGTGA AGAAGTAAAT TTAAGGCATG CTGAAAAACC CGAATCAATT CAATTTATAA AGAAAAAAAT GGATGGCCAA GTGCTTTCTC CAAATGAAAT AAGGACAATA ATTGATGAAA TAGTCTCAAA AAAGCTTTCA AATATCGAAC TTGCAGCATT TGTTACGTCA ACATATGTAA ACGGAATGAA TATGGAAGAA ATTGTCGAAA TGACAAAAAG AATGGCTGAA ACTGGGGACA TGATTTCATG GGAAAAAAGT CTTGTTGTAG ATATTCACAG TATCGGCGGA GTTCCTGGAA ATAAGTATGC ACTTCTTTCA ATTCCAATTC TTGCAGCCGC AGGAATTACA ATTCCAAAAA CATCTTCAAG AGCAATTACG TCACCAGCAG GTACTGCTGA CGTTATGGAA GTTTTAACAA ATGTAGAGCT AGATGAGGAA GAATTAAAAA GAGTTGTAAA AGCAACAAAC GGCTGTTTGG TATGGGGTGG AGGAGTTAAC TTAGCACCTG CAGATGACAT TATAATCAAT GTTGAAAGAC CTGTTTCAAT AGATCCTCAA CCACAACTTC TTGCAAGTGT AATGGCTAAA AAAGTTGCAA CGGGTATTAA ATACGCAGTA ATAGATATTC CCGTTGGAAA AGGCGTTAAA ATTAAAAATG AAGCAGAAGG TGCTAAATTA GCAAGAAAAT TCATTGAATT AGGAGAATTA TTAAATATCC GAGTTGAATG TGTTTTAACT TATGGGGGAC AACCATTAGG ACGTGCAATC GGGCCGGCAT TAGAGGCAAA AGAAGCCTTG GAAGCATTAA CTGATCCAAA AAGTGCACCA AAAAGTTTAA TTGAAAAAGC CATATCCTTA GCAGGAATAC TGCTTGAACT TGGTGGTTCA GCACAAATTG GGGATGGACA AAAGTTAGCA TGGGAAATAC TTGAATCAGG ACGCGCACTT GAAAAATTCA ACCAGATTAT AGTCGAACAA GGTGGGACTC CGAAAAAACC GGAGGAAATT GAACTTGGAA AATATGTTGA AGAAGTTCGT TCCCCAATTG ACGGCTACAT TGTAGGGATA AATAATACTT CAATAACAAA CGTTGTAAAA GAAGCTGGGG CTCCAAGGGA TAAAAAAGCA GGTCTTCTTT TAAATGCAAA AATTGGAAAT AAGGTAAAAC GTGGTGACAT ATTATACACG ATATATTCAG GCTCTGAAGA GAGATTAAAT TCAGCAGTTA ATCTTGCAAG AAGGGTTTAC CCGGTAAATG TTGAAGGAAT GATGATTGAA AGAATAAGTA AATTTTAA
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Protein sequence | MLFLNAKFID LDLGANAVIV NEEDLKGTSY YPQDRVLIES HSGSVLGILY STKTMVQKGE VGIPVRKMKG ISLKEGEEVN LRHAEKPESI QFIKKKMDGQ VLSPNEIRTI IDEIVSKKLS NIELAAFVTS TYVNGMNMEE IVEMTKRMAE TGDMISWEKS LVVDIHSIGG VPGNKYALLS IPILAAAGIT IPKTSSRAIT SPAGTADVME VLTNVELDEE ELKRVVKATN GCLVWGGGVN LAPADDIIIN VERPVSIDPQ PQLLASVMAK KVATGIKYAV IDIPVGKGVK IKNEAEGAKL ARKFIELGEL LNIRVECVLT YGGQPLGRAI GPALEAKEAL EALTDPKSAP KSLIEKAISL AGILLELGGS AQIGDGQKLA WEILESGRAL EKFNQIIVEQ GGTPKKPEEI ELGKYVEEVR SPIDGYIVGI NNTSITNVVK EAGAPRDKKA GLLLNAKIGN KVKRGDILYT IYSGSEERLN SAVNLARRVY PVNVEGMMIE RISKF
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