Gene Mevan_1338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMevan_1338 
Symbol 
ID5325128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus vannielii SB 
KingdomArchaea 
Replicon accessionNC_009634 
Strand
Start bp1365285 
End bp1366802 
Gene Length1518 bp 
Protein Length505 aa 
Translation table11 
GC content37% 
IMG OID640787030 
Productthymidine phosphorylase 
Protein accessionYP_001323847 
Protein GI150400080 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0213] Thymidine phosphorylase 
TIGRFAM ID[TIGR02645] putative thymidine phosphorylase
[TIGR03327] AMP phosphorylase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.620213 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGTTTT TGAATGCAAA GTTTATAGAT CTCGATTTAG GTGCAAATGC GGTTATCGTA 
AATGAAGAGG ATTTGAAGGG AACCTCCTAC TACCCTCAAG ACCGGGTTTT GATAGAATCA
CACAGCGGTT CTGTTTTAGG AATACTTTAT TCAACTAAAA CTATGGTTCA AAAAGGTGAA
GTTGGAATAC CTGTGCGTAA AATGAAAGGT ATTTCTTTAA AAGAGGGTGA AGAAGTAAAT
TTAAGGCATG CTGAAAAACC CGAATCAATT CAATTTATAA AGAAAAAAAT GGATGGCCAA
GTGCTTTCTC CAAATGAAAT AAGGACAATA ATTGATGAAA TAGTCTCAAA AAAGCTTTCA
AATATCGAAC TTGCAGCATT TGTTACGTCA ACATATGTAA ACGGAATGAA TATGGAAGAA
ATTGTCGAAA TGACAAAAAG AATGGCTGAA ACTGGGGACA TGATTTCATG GGAAAAAAGT
CTTGTTGTAG ATATTCACAG TATCGGCGGA GTTCCTGGAA ATAAGTATGC ACTTCTTTCA
ATTCCAATTC TTGCAGCCGC AGGAATTACA ATTCCAAAAA CATCTTCAAG AGCAATTACG
TCACCAGCAG GTACTGCTGA CGTTATGGAA GTTTTAACAA ATGTAGAGCT AGATGAGGAA
GAATTAAAAA GAGTTGTAAA AGCAACAAAC GGCTGTTTGG TATGGGGTGG AGGAGTTAAC
TTAGCACCTG CAGATGACAT TATAATCAAT GTTGAAAGAC CTGTTTCAAT AGATCCTCAA
CCACAACTTC TTGCAAGTGT AATGGCTAAA AAAGTTGCAA CGGGTATTAA ATACGCAGTA
ATAGATATTC CCGTTGGAAA AGGCGTTAAA ATTAAAAATG AAGCAGAAGG TGCTAAATTA
GCAAGAAAAT TCATTGAATT AGGAGAATTA TTAAATATCC GAGTTGAATG TGTTTTAACT
TATGGGGGAC AACCATTAGG ACGTGCAATC GGGCCGGCAT TAGAGGCAAA AGAAGCCTTG
GAAGCATTAA CTGATCCAAA AAGTGCACCA AAAAGTTTAA TTGAAAAAGC CATATCCTTA
GCAGGAATAC TGCTTGAACT TGGTGGTTCA GCACAAATTG GGGATGGACA AAAGTTAGCA
TGGGAAATAC TTGAATCAGG ACGCGCACTT GAAAAATTCA ACCAGATTAT AGTCGAACAA
GGTGGGACTC CGAAAAAACC GGAGGAAATT GAACTTGGAA AATATGTTGA AGAAGTTCGT
TCCCCAATTG ACGGCTACAT TGTAGGGATA AATAATACTT CAATAACAAA CGTTGTAAAA
GAAGCTGGGG CTCCAAGGGA TAAAAAAGCA GGTCTTCTTT TAAATGCAAA AATTGGAAAT
AAGGTAAAAC GTGGTGACAT ATTATACACG ATATATTCAG GCTCTGAAGA GAGATTAAAT
TCAGCAGTTA ATCTTGCAAG AAGGGTTTAC CCGGTAAATG TTGAAGGAAT GATGATTGAA
AGAATAAGTA AATTTTAA
 
Protein sequence
MLFLNAKFID LDLGANAVIV NEEDLKGTSY YPQDRVLIES HSGSVLGILY STKTMVQKGE 
VGIPVRKMKG ISLKEGEEVN LRHAEKPESI QFIKKKMDGQ VLSPNEIRTI IDEIVSKKLS
NIELAAFVTS TYVNGMNMEE IVEMTKRMAE TGDMISWEKS LVVDIHSIGG VPGNKYALLS
IPILAAAGIT IPKTSSRAIT SPAGTADVME VLTNVELDEE ELKRVVKATN GCLVWGGGVN
LAPADDIIIN VERPVSIDPQ PQLLASVMAK KVATGIKYAV IDIPVGKGVK IKNEAEGAKL
ARKFIELGEL LNIRVECVLT YGGQPLGRAI GPALEAKEAL EALTDPKSAP KSLIEKAISL
AGILLELGGS AQIGDGQKLA WEILESGRAL EKFNQIIVEQ GGTPKKPEEI ELGKYVEEVR
SPIDGYIVGI NNTSITNVVK EAGAPRDKKA GLLLNAKIGN KVKRGDILYT IYSGSEERLN
SAVNLARRVY PVNVEGMMIE RISKF